DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabGGTb and fntb

DIOPT Version :10

Sequence 1:NP_524894.1 Gene:RabGGTb / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001002128.1 Gene:fntb / 323500 ZFINID:ZDB-GENE-030131-2220 Length:419 Species:Danio rerio


Alignment Length:321 Identity:102/321 - (31%)
Similarity:154/321 - (47%) Gaps:34/321 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLER-------KSIIEFVKRCQ 90
            :|..|::...:...|...|: :..|....||      |:..||.||.       ..:.:|:.|||
Zfish    62 QHYHYLKKGLRHLSDAYECL-DASRPWLCYW------ILHSLELLEEPVPAAVASDVCQFLARCQ 119

  Fly    91 CPNTGGFAPCEGHDPHLLYTLSAIQILC---TYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGE 152
            .| ||||....|...||..|.:|:..||   |.:|...|:||.::.|:..::||||||.....||
Zfish   120 AP-TGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPDGSFVMHIGGE 183

  Fly   153 VDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSL 217
            ||.|.::||.:..:|...:..|: .:....:::||.| .:||.|..||.|:|.|..:|......:
Zfish   184 VDVRSAYCAASVASLTNIIAPTL-FDGTHNWIISCQN-WEGGLGGVPGLEAHGGYTFCGTAALVI 246

  Fly   218 THRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVLASLTIMGRL------------ 269
            ..:.|:||:..|..|:..||:. .||..||..||.|.|||:|....|.::.|.            
Zfish   247 LGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALFKEGDSTLSVS 311

  Fly   270 HWISSEK-LQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCM 329
            .|:...| ||::||.|.....||..|:.|...|.:||.:.:.|||:..|.|.|.::..|.:
Zfish   312 SWMFERKALQEYILLCCQNPGGGLLDKPGKSRDFYHTSYCLSGLSVAQHFGNKDLHNELIL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabGGTbNP_524894.1 GGTase-II 29..315 CDD:239224 98/305 (32%)
fntbNP_001002128.1 FTase 60..358 CDD:239223 98/305 (32%)

Return to query results.
Submit another query.