DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and fntb-1

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001379157.1 Gene:fntb-1 / 179946 WormBaseID:WBGene00006465 Length:401 Species:Caenorhabditis elegans


Alignment Length:343 Identity:101/343 - (29%)
Similarity:157/343 - (45%) Gaps:57/343 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KHVEYIENHGKQEDDYEYCMTEFLRMSG-----IYWGTTALDIM-GQLERLERKSIIEFVKRCQC 91
            ||..|:..:.|.      |.:.:..:..     .|||..||.|: .::.....::||.|:|.|:.
 Worm    65 KHASYLLRYLKN------CPSSYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEH 123

  Fly    92 PNTGGFAPCEGHDPHLLYTLSAIQILCTY---DALEEIDREAVVRFVVGLQQPDGSFFGDKWGEV 153
            |. ||:....|...||..|.:|:..|.:.   :||..|:|..:..|:...:...|.|:..:.||:
 Worm   124 PE-GGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEI 187

  Fly   154 DTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLT 218
            |.|.::||:|:..::|.....|. ....::::| |...:||||.:|..|:|.|..:|.|....|.
 Worm   188 DMRSAYCALATCEIVGLPMDEIS-NGVAEWIIS-CQSFEGGFGGEPYTEAHGGYTFCAVASLVLL 250

  Fly   219 HRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVLASLTIM-------GRLHWISSE 275
            :|..|.|::.|..|...||:. .||..||..||.|.|||:|..|...::       ||    |.|
 Worm   251 NRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREGR----SLE 311

  Fly   276 K-------LQQFIL-SCQDTETGGFSDRTGNMPDIFHTLFGIGGLSL-----LGHSG-------- 319
            |       |:::|| .||... |||.|:.....|::||.:.:.|||:     |...|        
 Worm   312 KGLFEARMLEEYILVGCQSVH-GGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGKILGGDVN 375

  Fly   320 -LKAINP----TLCMPQY 332
             |..|||    |:...|:
 Worm   376 MLAEINPVFNVTIASEQF 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 93/311 (30%)
PLN03201 33..340 CDD:215630 101/343 (29%)
fntb-1NP_001379157.1 FTase 63..358 CDD:239223 93/306 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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