DRSC/TRiP Functional Genomics Resources

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Protein Alignment NFIA and nfi-1

DIOPT Version :10

Sequence 1:NP_001138984.1 Gene:NFIA / 4774 HGNCID:7784 Length:554 Species:Homo sapiens
Sequence 2:NP_001367580.1 Gene:nfi-1 / 174225 WormBaseID:WBGene00003592 Length:823 Species:Caenorhabditis elegans


Alignment Length:60 Identity:18/60 - (30%)
Similarity:24/60 - (40%) Gaps:16/60 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   481 VFEDSAAITSMQI------SSKRQ-----QLYIASRSAVAQIALHRCTALGRACAEC-CL 528
            |||.:..:..:.:      .||.|     .|.:||.:.|....|| |   |..|..| ||
 Worm    30 VFEKAHVVVFIYLLLRPRGLSKAQTNLVIDLNLASNACVCACFLH-C---GLVCGFCLCL 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NFIANP_001138984.1 NfI_DNAbd_pre-N 54..91 CDD:463134
MH1 113..217 CDD:460833
CTF_NFI 259..546 CDD:459967 18/60 (30%)
nfi-1NP_001367580.1 NfI_DNAbd_pre-N 66..106 CDD:463134 9/24 (38%)
MH1 128..231 CDD:460833
Blue background indicates that the domain is not in the aligned region.

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