DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12253 and si:dkey-56d12.4

DIOPT Version :10

Sequence 1:NP_652056.2 Gene:CG12253 / 47730 FlyBaseID:FBgn0026148 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001103508.1 Gene:si:dkey-56d12.4 / 799220 ZFINID:ZDB-GENE-060531-147 Length:464 Species:Danio rerio


Alignment Length:140 Identity:25/140 - (17%)
Similarity:46/140 - (32%) Gaps:40/140 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 MVRCSSSLFTPVRFPRNQSE--ELYNHAHA------------------VTYASARKCLN-LLMSR 302
            ::.||.   ||::.|.|...  |.|:|.:.                  ::.|...:|.: .:.:.
Zfish   292 IIDCSE---TPLQKPHNLDSRGESYSHYYGQNTIKYLVSIAPCGLIMFISPAYGGRCSDKFITAN 353

  Fly   303 FGILATEIQGSHGSAKQTITALAILHNMAMEWVDPSIDTEQNISPFNSTFFNSIGRSPKSGDDNN 367
            .|.|.....|....|.:..|...:|:...::.|.|:              |...|......|..|
Zfish   354 SGFLEYLRPGDEVMADRGFTISDLLYEKKVKLVIPA--------------FTKKGMQLSEEDTTN 404

  Fly   368 RRQF--IKTH 375
            .|:.  ::.|
Zfish   405 TRRIANVRVH 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12253NP_652056.2 DDE_Tnp_4 203..329 CDD:463855 17/90 (19%)
si:dkey-56d12.4NP_001103508.1 THAP 6..>79 CDD:461662
HTH_Tnp_4 218..260 CDD:463934
DDE_Tnp_4 293..452 CDD:463855 25/139 (18%)
Blue background indicates that the domain is not in the aligned region.

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