DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12253 and harbi2

DIOPT Version :10

Sequence 1:NP_652056.2 Gene:CG12253 / 47730 FlyBaseID:FBgn0026148 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001122281.1 Gene:harbi2 / 560936 ZFINID:ZDB-GENE-030131-3975 Length:351 Species:Danio rerio


Alignment Length:351 Identity:89/351 - (25%)
Similarity:142/351 - (40%) Gaps:68/351 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QRFQRSLKDFDYFKDFQCFLNIKHNSRARATHIKKRNPRFNPLTDLNEHKFRLKYRYTKENLRRI 69
            |..||:|:.....:|.|                       |||...:||.:. :||::.|.:..:
Zfish    15 QIVQRALRRERVIRDVQ-----------------------NPLAFSDEHLYE-RYRFSAEGMLYL 55

  Fly    70 IEIVRDDLEIEYFEPLKREQ-VPIDLQILSAIRLWGGTEHPKLTAMAHGVSLRTLAKITRRVASV 133
            ..:    ||.....|.:|.. ..:...|..|:|.:...........|..:|..|:.:..|||...
Zfish    56 CRL----LEPHIKNPTRRSHATTVPQMICIALRFFTSGTFLYEVGDAEKLSKNTVCRTIRRVVIA 116

  Fly   134 LSSKASRYIRMPA---TLSEKERSGSAFQAIANMPQVIGAL------LQTTVRFQPENCAPDLDG 189
            |....:.::..|.   |.:.||    .|..||.:|.||||:      :.|.|:            
Zfish   117 LQRYINTFVAFPGHLPTQAIKE----GFSQIAGLPGVIGAIDCIHIPISTPVK------------ 165

  Fly   190 EELLPALTSRE--EELHIQIVCDAAHKIRDLDIRLIDEQSMLTDTEMFGLSKIKDRFEQNEFRGR 252
             |:.....:|.  ..:::|:.||....|..||.|.   ...:.|.::|..||:..||:|..|.| 
Zfish   166 -EIEATFLNRNATHSINVQMTCDHQCLITSLDARW---PGSMQDNQIFEKSKLCQRFQQGLFDG- 225

  Fly   253 ILLGNEMVRCSSSLFTPVRFPRNQSEELYNHAHAVTYASARKCLNLLMSRFGILATEIQGSHGSA 317
            :|:|:....|.|.|.||...|:.:.:..:|.|.:.|.......|.:|.:||..| .:::.|...|
Zfish   226 VLVGDGTYACQSFLLTPYPEPKTKPQHEFNIALSQTRLKIDNTLAILKARFNCL-RDLRVSPERA 289

  Fly   318 KQTITALAILHNMAMEWVDPSIDTEQ 343
            .|.:.|.|:|||:|      ||..||
Zfish   290 SQIVGACAVLHNIA------SIRKEQ 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12253NP_652056.2 DDE_Tnp_4 203..329 CDD:463855 38/125 (30%)
harbi2NP_001122281.1 DDE_Tnp_4 153..301 CDD:463855 42/165 (25%)

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