DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TTLL4A and ttll5

DIOPT Version :9

Sequence 1:NP_001162947.1 Gene:TTLL4A / 47729 FlyBaseID:FBgn0026147 Length:1071 Species:Drosophila melanogaster
Sequence 2:XP_012823512.2 Gene:ttll5 / 100158545 XenbaseID:XB-GENE-5889203 Length:1128 Species:Xenopus tropicalis


Alignment Length:566 Identity:175/566 - (30%)
Similarity:282/566 - (49%) Gaps:86/566 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 PQSTPSFLSSQSSE--DDLKNPD---------SLLVPSLFPYVPPYLSFSSNTKR-GPRVPPDLH 564
            |:..|.....:.||  ||.|..:         |..||.:..:....|..:.:.:. |.|..    
 Frog     2 PEMVPRGQQDEQSEEDDDSKKGEYSCILWAGGSRKVPIVMFHAEAVLHKNLSLRAVGERYK---- 62

  Fly   565 RVLKWRITNIMPKVVRLILANSGMRMLK-KTNDWMGVW-GKHLKSPCFKAIRSYQKINHLPGSFR 627
              |.::|.....::||.||:..|.:.:. .:||:..:| |.|:|....:::.::||:||.|.|:.
 Frog    63 --LSYKIVRTDSRLVRSILSAHGFQEVNANSNDFNIMWTGSHVKPHIMRSLTNFQKVNHFPRSYE 125

  Fly   628 IGRKDSCWKNLQRQMGKHSNKEFGFMPRTYIIPNDLGALRRHWPKYAQRNTKWIIKPPASARGAG 692
            :.|||..:||:||....|..|.|..:|:||::|.:   .:.....:|:....||:||.||:||.|
 Frog   126 LTRKDRLYKNVQRMQQSHGFKNFHLLPQTYLLPAE---YQDFCTAFAKDRGPWIVKPVASSRGRG 187

  Fly   693 IRVINRWGQIPKRRPLIVQKYIERPLLINGSKFDLRLYVLVTSVNPLRVFMYHNGLARFASVKYS 757
            :.:||....|.....::|.:||..||||:|.|||:|||||:||.:||.:::|..||.|||:.||.
 Frog   188 VYLINSPSLISMEDNILVSRYIGNPLLIDGFKFDVRLYVLITSYDPLVIYLYEEGLTRFATAKYD 252

  Fly   758 AKTDTLNDRCMHLTNYSINKFSSNYSKNEDVNA-CHGHKWTIKSLWTYLANRGVRTDCLWEALRS 821
            .....:.::.|||||||:||.|.:|...:|.:. .:|:||::.::..||...|..|..|...:..
 Frog   253 RAAKNIKNQFMHLTNYSVNKKSGDYVSCDDPDVEDYGNKWSMSAMLRYLKQDGKDTAALMSQVED 317

  Fly   822 LVLRTILAGENGINSMIRANVESKYSCFELFGFDVILDSDLVPWLLEVNISPSLHSELPLDAHVK 886
            |:::||::.|..|.|..::.:..:.:||||:||||::|.:|.|||||||:||||..:.|||..||
 Frog   318 LIIKTIVSAELPIASACKSLITHRGNCFELYGFDVLIDGNLKPWLLEVNLSPSLACDAPLDLKVK 382

  Fly   887 APLVQGVLNTALYNVPPKLSLDKQKELAAEFSFPPGTQMCYDKRLYINYLSREEKIKHNTFTRKS 951
            |.::..:.  .|..|..:   |.|:.      |...:...||||                 |:||
 Frog   383 ASMISDMF--TLVGVECQ---DPQQR------FGRASSSLYDKR-----------------TQKS 419

  Fly   952 MEDR----NEYVD---------------AILNNLTPDDVRCLIIAEDELARCAPLERIFPTDQTH 997
            ...|    |: :|               :.|..|:.::::.|...:||..|.....||||...|.
 Frog   420 THQRPLSAND-IDTGLQGGNREKAVRRTSCLLGLSIEELKILRRVQDEYERRGGFVRIFPRHNTW 483

  Fly   998 K----YLKYNDTPRYYNRLLDAWESRYANNRTEGIALLRDYCQNKY 1039
            :    :|:|. |...|..:...:.:|.|.|         |:|:..:
 Frog   484 QLYGSFLEYK-TSLNYMLVTHLFPNRAAGN---------DHCEKNW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTLL4ANP_001162947.1 TTL 614..908 CDD:281171 116/294 (39%)
ttll5XP_012823512.2 TTL 113..390 CDD:397308 114/279 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250453at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.