DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and CG4282

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:426 Identity:81/426 - (19%)
Similarity:146/426 - (34%) Gaps:126/426 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PQSSVPAPQPPGKRKKPAELELTCGWRDCQEICTGEWSLNGHIGDHLEHYAKAQDDRGA-HAEHT 67
            |:.:|..|:...||.||||.::    |..:|:              ||...|.|::... .|:..
  Fly   278 PKRTVVRPKKYKKRTKPAEPKV----RMSREL--------------LEQRKKQQEEYDVIIAKFF 324

  Fly    68 EHQCTWNSCDFRTENQVEFERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEKLPALGQN 132
            ........|:....|..|.:||.             :|...:.|....|                
  Fly   325 TSVLPCAICNLLVHNFTEMQRHH-------------RLTHQVDPGYMMC---------------- 360

  Fly   133 FRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNW-------AMCHKHMGNKY 190
                   |.|:|.......:|::.|                     |       ::|.|...|..
  Fly   361 -------CGRKFTQRKVLAEHVLVH---------------------WNPDHFKCSVCEKSFQNSR 397

  Fly   191 RLIEHISTHSN---KKQVACFHCGELFRTKTTLFDH-LRRQPENNTNSFQCAQCFKFFATKKLLK 251
            .|..|...|.:   |...:|..|.:.|.:||.:..| |.:....:...|.|::|.|.|.|::.||
  Fly   398 HLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLK 462

  Fly   252 SHVVRHVNCYKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHS-- 314
            :|:                   ||:       |..:..:.|.:|..:...:..|.||.:::||  
  Fly   463 NHM-------------------SSM-------HDPESTIICDKCGKQMRTKIILKKHQELMHSDK 501

  Fly   315 ----KTVHQCEHPDCHYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGF 375
                ..:.||:  .|...::..|.:::|...:|..:...:.||.|.:...:.::|..|:...|  
  Fly   502 PRPEPELQQCQ--ICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRRHIYHNH-- 562

  Fly   376 RLPSGHKRFTYRVDENGFYRLETTRLESLEVTQQIL 411
               ...::|...:.|..|.|.:..:..:...|.::|
  Fly   563 ---ECERKFKCTMCEKAFKRPQELKEHTSTHTGEVL 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..225 CDD:275368 6/18 (33%)
C2H2 Zn finger 237..257 CDD:275368 8/19 (42%)
C2H2 Zn finger 263..284 CDD:275368 2/20 (10%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 6/33 (18%)
C2H2 Zn finger 360..378 CDD:275368 5/40 (13%)
LIM 361..>400 CDD:295319 9/59 (15%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
zf-C2H2_8 389..465 CDD:292531 22/75 (29%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 4/22 (18%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 3/19 (16%)
C2H2 Zn finger 598..619 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444637
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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