DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17829 and CG17568

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:341 Identity:77/341 - (22%)
Similarity:123/341 - (36%) Gaps:69/341 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ENQVEFERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEKLPALGQNFRCGWTDCEREFV 145
            ||.|:.|......|....|.:.|:| .||   :...|.|..|........:..|.....|.:.:.
  Fly   225 ENDVKSEMLDSCEGDDDFLPVDGQL-MDL---VAVATTPNTLESTAEEKAKRGRMDCEKCGKVYR 285

  Fly   146 SIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEH-ISTHSNKKQVACFH 209
            :...::.|:.:..   ..|::..:.::..|.|:  :|:|.:.:...|..| ...|.|.|...|..
  Fly   286 NRASYEKHLEREC---RRIERRVKVDKTTTTCD--ICNKTLSSATALKLHKEGIHQNVKPYICDS 345

  Fly   210 CGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHVN-CYKCTMCDMTCSSA 273
            ||:..:|.|.|.:|  :.....:..|:|..|...|..:..||:|...|.. .:.|.:|.....:.
  Fly   346 CGKQLKTITALNEH--KLVHTESRPFECTVCKAGFKNRARLKAHYQIHAEPSFVCNICGKKLQTR 408

  Fly   274 SSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDCHYSVRTYTQMRRH 338
            .:...| :..|.:::.|||..|.....|            |||                  ::.|
  Fly   409 RTWNMH-KVVHTEERRLKCDVCGALFKR------------SKT------------------LKTH 442

  Fly   339 FLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKH--------GFRLPSGHKRFTYRVDENGFYR 395
            .|...|..|  |.|:.|.:.|....:..:|.:|||        |.||||               |
  Fly   443 LLSHTGLRP--YVCNYCGKSFACNANCRSHKLKKHPQEVQQEDGARLPS---------------R 490

  Fly   396 LETTRLESLEVTQQIL 411
            |....|:.|.|..|.|
  Fly   491 LNVPTLDELRVMTQKL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/17 (24%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..284 CDD:275368 3/20 (15%)
C2H2 Zn finger 292..311 CDD:275368 3/18 (17%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 43/194 (22%)
C2H2 Zn finger 314..335 CDD:275368 5/22 (23%)
C2H2 Zn finger 343..363 CDD:275368 7/21 (33%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 398..418 CDD:275368 3/20 (15%)
C2H2 Zn finger 426..446 CDD:275368 8/49 (16%)
zf-H2C2_2 439..463 CDD:290200 8/25 (32%)
C2H2 Zn finger 454..475 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.