DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and F56D1.1

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_495042.3 Gene:F56D1.1 / 186375 WormBaseID:WBGene00018959 Length:454 Species:Caenorhabditis elegans


Alignment Length:431 Identity:89/431 - (20%)
Similarity:142/431 - (32%) Gaps:149/431 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CQEICT-------GEWSLNGHIGDHLEHYAKAQDDRGAHAEHTEHQCTWNSCDFRTENQVEFERH 89
            |.|..|       ||  |..|   |..|::||           .|:|.  .|.:..|......||
 Worm    94 CLECSTITKFGTYGE--LRAH---HKLHHSKA-----------SHKCP--QCSYTNEKPAFIRRH 140

  Fly    90 ---SYYHGYYLNL------LLQGKLEC---DLHPEIPACTAPAR---------LMEKLPALGQNF 133
               ::..|....:      :.:.:|:.   :.|..||..|...|         |.|..|.:..: 
 Worm   141 FEQNHVDGIPCTITGCCIKVAKNRLKAHIKEYHTSIPLSTEQTRSKLSFNKCPLCEYKPDVSDD- 204

  Fly   134 RCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHIST 198
                 |.|::   ..:.:||          :|:..|:..| .:|... |..::|:. .:.||:||
 Worm   205 -----DPEQQ---QKDLEDH----------VQRIHEEREP-ALCTLG-CGVYLGSG-SVSEHLST 248

  Fly   199 HSNKKQVACFHCGELFR---------------------TKTTL--------------FDHLRRQP 228
                       |..|.:                     |:|||              ...:....
 Worm   249 -----------CSSLIQNIPSSSQSTPALQNDEWNDANTETTLSTITGTSSQFERDSVSEVTNDL 302

  Fly   229 ENNTNSFQCAQCFKFFATK---KLLKSHVVRHVNCYKCTMCDMTCSSASSLTTHIRYRHLKDKPL 290
            ..|.|...  :..:|..|:   |:.|....|....:.|.:|..|.:...:|..|:|..|      
 Worm   303 SENINDID--EEIEFGTTEPPNKIRKHSRSRVHGDFSCEICLKTFTLRDNLRKHVRVYH------ 359

  Fly   291 KCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPD-------CHYSVRTYTQMRRHFLEVH-GNNP 347
              ||...:.|:.:. .||      :..::|:...       |..:.||...:..|| .|| |..|
 Worm   360 --SENSQKVVKSTG-PKH------QEQYKCDRKSKDGDETTCGKTFRTEQALHDHF-NVHDGIKP 414

  Fly   348 ILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFTYRV 388
              |:||.|.:.|.:....:.||.|.|    .:..|..|.||
 Worm   415 --YSCHTCNQKFHARDRFAVHLSKYH----QTSIKDLTARV 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..225 CDD:275368 6/52 (12%)
C2H2 Zn finger 237..257 CDD:275368 4/22 (18%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
F56D1.1NP_495042.3 C2H2 Zn finger 67..87 CDD:275368
C2H2 Zn finger 94..116 CDD:275368 8/26 (31%)
C2H2 Zn finger 338..359 CDD:275368 6/20 (30%)
C2H2 Zn finger 380..409 CDD:275368 6/29 (21%)
C2H2 Zn finger 417..434 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X96
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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