DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and hinf-1

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:408 Identity:109/408 - (26%)
Similarity:167/408 - (40%) Gaps:45/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PAELELTCGWRDCQEICTGEWSLNGHIGDHLEHYAKAQDDRGAHAEHTEH-QCTWNSCDFRTENQ 83
            |......|.|..    |....|......|||..:....::...:..|... ||....|:...::.
 Worm   134 PQVFTFVCLWGQ----CVSSSSSKDEFVDHLFGHVSVIEEGVQNGNHMNTVQCKVRGCNKHLDSI 194

  Fly    84 VEFERHSYYHGYYLNLLLQGK-----------LE-CDLHPEIPACTAPARLMEKLPALGQNFRCG 136
            .:..||...|.:..:...:|.           :| |...|    ||       .:...|....|.
 Worm   195 FQLHRHVSMHVFQADCQQKGSEALIEKEDYIGIESCGFEP----CT-------NINYEGMLLNCQ 248

  Fly   137 WTDCEREFVSIVEFQDHIVKHALFEYDIQKTPE-----DERPKTMCNWAMCHKHMGNKYRLIEHI 196
            |.||...|.|:.|..||:..|.....|:.:..:     |::....|.|..|.:...:|..|..|.
 Worm   249 WEDCGMPFNSLTELFDHVGHHIDGVGDVDRIQQNFSNGDKKVVFPCKWTACTQVADSKANLRRHA 313

  Fly   197 STHSNKKQVACFHCGELFRTKTTLFDH------LRRQPENNTNSFQCAQCFKFFATKKLLKSHVV 255
            ..||.:|.:||..|...|..:..|:||      |.:.||.. :.:.|..|.|.|.|:|.|..||.
 Worm   314 RHHSGEKVLACPFCARFFSRRDKLYDHCLRRTILMKNPEME-DPYLCKLCQKRFGTEKALCMHVT 377

  Fly   256 RHVNCYKCTMCDMTCSSASSLTTHIRYRH-LKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQ 319
            ||:....|.:|.:.....:.|..|:..:| .:.|..||..|......||:|.:|. :.||..::.
 Worm   378 RHLVSLTCPLCSLGLGCRAELHRHLMTKHSRRSKDFKCDTCSKLFFTESELNRHA-VYHSDVMYS 441

  Fly   320 CEHPDCHYSVRTYTQMRRHFLEVHGN-NPILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKR 383
            |:|  |....:...|:.:|..|...| ||..|.||.|:|.:.:|.:|..||.::|..::|.|..|
 Worm   442 CKH--CPEKFKWKKQLMKHMKEHDENFNPSPYTCHLCDRTYTTGFALGRHLTRQHRLQIPYGFSR 504

  Fly   384 FTYRVDENGFYRLETTRL 401
            |||:...:|..||:|.:|
 Worm   505 FTYKKCADGLMRLQTKKL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/16 (25%)
C2H2 Zn finger 207..225 CDD:275368 6/23 (26%)
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 263..284 CDD:275368 4/20 (20%)
C2H2 Zn finger 292..311 CDD:275368 6/18 (33%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 4/16 (25%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..406 CDD:275368 4/20 (20%)
C2H2 Zn finger 415..435 CDD:275368 6/20 (30%)
C2H2 Zn finger 442..462 CDD:275368 5/21 (24%)
C2H2 Zn finger 473..494 CDD:275368 8/20 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 80 1.000 Domainoid score I5595
eggNOG 1 0.900 - - E1_KOG3608
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I2866
Isobase 1 0.950 - 0 Normalized mean entropy S3785
OMA 1 1.010 - - QHG48157
OrthoDB 1 1.010 - - D564393at33208
OrthoFinder 1 1.000 - - FOG0005624
OrthoInspector 1 1.000 - - oto17552
orthoMCL 1 0.900 - - OOG6_107351
Panther 1 1.100 - - LDO PTHR24391
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5014
SonicParanoid 1 1.000 - - X96
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.860

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