DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and ZNF548

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001166244.1 Gene:ZNF548 / 147694 HGNCID:26561 Length:545 Species:Homo sapiens


Alignment Length:491 Identity:115/491 - (23%)
Similarity:178/491 - (36%) Gaps:112/491 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSVPAPQP--PGKRKKPAELELTCGWRDCQEICTGEWSLNGHIGDHLEHYAKAQDDRGAHAE--- 65
            |.|.|.:|  ..::..|:|   |||......:|..|     |.|.|.|.:...     ..||   
Human    81 SEVTASKPCLSSQKVHPSE---TCGPPLKDILCLVE-----HNGIHPEQHIYI-----CEAELFQ 132

  Fly    66 HTEHQCTWNSCDFRTENQVEF--ERHSYYHGYYLNLLLQG-----KLECDLHPEIPACT-APARL 122
            |.:.|...|..  |.::.:..  :.|..:....:...::|     ...|.|..:.|... .|.|.
Human   133 HPKQQIGENLS--RGDDWIPSFGKNHRVHMAEEIFTCMEGWKDLPATSCLLQHQGPQSEWKPYRD 195

  Fly   123 MEKLPAL--GQN-FRCGWTDCEREFVSIVEFQDHIVKHA------------LFEYDI-----QKT 167
            .|...|.  ||| ::|  ::|.:.|.....|.:|...|.            .|:|..     |..
Human   196 TEDREAFQTGQNDYKC--SECGKTFTCSYSFVEHQKIHTGERSYECNKCGKFFKYSANFMKHQTV 258

  Fly   168 PEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNKKQVACFHCGELFRTKTTLFDHLRRQPENNT 232
            ...||... |.  .|.|.....|||:.|...|:.::...|..||:.||..:|...|.|  .....
Human   259 HTSERTYE-CR--ECGKSFMYNYRLMRHKRVHTGERPYECNTCGKFFRYSSTFVRHQR--VHTGE 318

  Fly   233 NSFQCAQCFKFFATKKLLKSH------------------------VVRHVNC------YKCTMCD 267
            ..::|.:|.|||.....|..|                        ::||...      |:|::|.
Human   319 RPYECRECGKFFMDSSTLIKHQRVHTGERPYKCNDCGKFFRYISTLIRHQRIHTGERPYECSVCG 383

  Fly   268 MTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHP----DCHYS 328
            ......|||..|.| .|..::|.|||||.      .....|.:::..:.||..|.|    :|...
Human   384 ELFRYNSSLVKHWR-NHTGERPYKCSECG------KSFRYHCRLIRHQRVHTGERPYECSECGKF 441

  Fly   329 VRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLS-AHLMKKHGFRLPSGHKRFTYRVDENG 392
            .|..:.:.:|:....|..|  |.|..|      ||:.| .|::.:|. ::.||.:.:.....:..
Human   442 FRYNSNLIKHWRNHTGERP--YECREC------GKAFSHKHILVEHQ-KIHSGERPYECSECQKA 497

  Fly   393 FYR----LETTRLESLEVTQQILSPQVNDSLAKPGT 424
            |.|    :...::.|.|  :.:.|..|.:||||..|
Human   498 FIRKSHLVHHQKIHSEE--RLVCSMNVGNSLAKTPT 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 6/16 (38%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 7/43 (16%)
C2H2 Zn finger 263..284 CDD:275368 7/20 (35%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 6/21 (29%)
ZNF548NP_001166244.1 KRAB 20..>60 CDD:214630
KRAB 20..59 CDD:279668
C2H2 Zn finger 211..231 CDD:275368 5/21 (24%)
COG5048 <215..311 CDD:227381 23/98 (23%)
C2H2 Zn finger 239..259 CDD:275368 3/19 (16%)
C2H2 Zn finger 267..287 CDD:275368 7/21 (33%)
zf-H2C2_2 280..304 CDD:290200 7/23 (30%)
COG5048 <292..507 CDD:227381 54/232 (23%)
C2H2 Zn finger 295..315 CDD:275368 8/21 (38%)
zf-H2C2_2 310..330 CDD:290200 5/21 (24%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
zf-H2C2_2 336..360 CDD:290200 2/23 (9%)
C2H2 Zn finger 351..371 CDD:275368 2/19 (11%)
zf-H2C2_2 364..388 CDD:290200 5/23 (22%)
C2H2 Zn finger 379..399 CDD:275368 7/20 (35%)
zf-H2C2_2 391..416 CDD:290200 11/31 (35%)
C2H2 Zn finger 407..427 CDD:275368 5/25 (20%)
zf-H2C2_2 420..444 CDD:290200 5/23 (22%)
C2H2 Zn finger 435..455 CDD:275368 3/19 (16%)
zf-H2C2_2 447..472 CDD:290200 8/32 (25%)
C2H2 Zn finger 463..483 CDD:275368 7/26 (27%)
C2H2 Zn finger 491..511 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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