DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC110437725

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_005168112.1 Gene:LOC110437725 / 110437725 -ID:- Length:362 Species:Danio rerio


Alignment Length:373 Identity:84/373 - (22%)
Similarity:128/373 - (34%) Gaps:103/373 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GKRKKPAELELTCGWRDCQEICTGEWSLNGHIGDHL--EHYAKAQDDRG--------AHAE-HTE 68
            |.||..:....||  ..|....|.:.:|..|:..|.  :.|:..|..:.        .|.. ||.
Zfish    71 GPRKSKSACNFTC--LQCGNCFTRKHNLQVHMRVHTGEKPYSCPQCGKSFKQNGYLKVHMRTHTG 133

  Fly    69 HQC-TWNSCDFRTENQVEFERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEKLPALGQN 132
            .:| |...|..|..|...|.:|...|                        ..|||          
Zfish   134 ERCYTCQQCGQRFYNTGNFAQHMRIH------------------------TGARL---------- 164

  Fly   133 FRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHIS 197
            :.|                                            ..|.|.:.....|..|:.
Zfish   165 YTC--------------------------------------------LQCGKSLYQSANLAAHMR 185

  Fly   198 THSNKKQVACFHCGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHV--NC 260
            .|:.:|..:|..||:.|:..:||..|:|  ..|:...|.|.||.|.||.|:.|:.|::.|.  ..
Zfish   186 IHTVEKPYSCIQCGKSFKQNSTLEAHIR--AHNDGRIFTCPQCGKSFAQKQDLEIHMLIHTGEKP 248

  Fly   261 YKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDC 325
            |.||.|.......|:|..|: ..|.::||..|::|......:|.|..|:.:.....|..|:  .|
Zfish   249 YTCTECGKRFRFKSTLKQHM-ISHTREKPFTCAQCGRSFTTKSSLMNHMNVHTGNIVFTCD--QC 310

  Fly   326 HYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKH 373
            ..::.....::.| ::.|...  .:.|..|.:.|||.:||:.| ||.|
Zfish   311 GKTLTRKDSIKNH-MKTHSVE--RFRCSECGKGFKSKRSLNTH-MKLH 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/16 (25%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 10/20 (50%)
LOC110437725XP_005168112.1 COG5048 <39..259 CDD:227381 57/269 (21%)
C2H2 Zn finger 83..103 CDD:275368 5/21 (24%)
zf-H2C2_2 95..120 CDD:290200 5/24 (21%)
C2H2 Zn finger 111..131 CDD:275368 2/19 (11%)
C2H2 Zn finger 139..159 CDD:275368 5/19 (26%)
C2H2 Zn finger 167..187 CDD:275368 5/63 (8%)
zf-H2C2_2 179..204 CDD:290200 8/24 (33%)
COG5048 <191..350 CDD:227381 48/166 (29%)
C2H2 Zn finger 195..215 CDD:275368 8/21 (38%)
CpXC 222..>271 CDD:291051 17/49 (35%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
zf-H2C2_2 235..258 CDD:290200 7/22 (32%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
zf-H2C2_2 264..288 CDD:290200 7/24 (29%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
C2H2 Zn finger 307..327 CDD:275368 3/22 (14%)
C2H2 Zn finger 334..354 CDD:275368 10/20 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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