DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC108182721

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_021326715.1 Gene:LOC108182721 / 108182721 -ID:- Length:416 Species:Danio rerio


Alignment Length:413 Identity:100/413 - (24%)
Similarity:154/413 - (37%) Gaps:98/413 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EHYAKAQDDRGAHAEH------TEHQC-TWNSCDFRTENQVEFERH-----------------SY 91
            ||:.|.:|.  .|.|.      .:..| |...||....::.:.:.|                 |:
Zfish    28 EHHVKIEDK--THLETDGVLKVRDKNCFTCTPCDKSLASKSKLKTHMRIHTGEKPFTCTQCGKSF 90

  Fly    92 YHGYYLNLLLQGKLECDLHP-EIP-ACTAPARLMEKLPALGQNFR---------CGWTDCEREFV 145
            .|...||..::      :|. |.| .||...:...|..:|.::.:         |  |.|.:.| 
Zfish    91 SHSSSLNQHMR------IHTGEKPFTCTQCGKSFSKSSSLYKHMKIHTGEKPLTC--THCGKSF- 146

  Fly   146 SIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNKKQVACFHC 210
                      .|:.|.....:....|:|.| |  ..|.|.......|.:|:..|:.:|...|..|
Zfish   147 ----------NHSSFLNLHMRIHTGEKPLT-C--PQCGKSFSKSSSLYKHMKIHTGEKPFTCTQC 198

  Fly   211 GELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHV--NCYKCTMCDMTCSSA 273
            |:.|...:.|..|:|  .......|.||||.|.|.....||.|::.|.  ..:.||.|..:.|.:
Zfish   199 GKSFYDSSYLKKHMR--IHTGEKPFTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSFSKS 261

  Fly   274 SSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQI----------------VHSKT------ 316
            |||..|:|. |..:||..|::|.......|.|.:|:.|                :||..      
Zfish   262 SSLYRHMRI-HTGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHSSNLNLHMR 325

  Fly   317 VHQCEHP----DCHYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGFRL 377
            :|..|.|    .|..|..|.:.:::| ::|| .....|.|..||..|     ::|..:|:|. |:
Zfish   326 IHTGEKPFTCTQCGKSFSTSSHLKQH-MKVH-TGVREYMCLECETTF-----ITAADLKRHQ-RI 382

  Fly   378 PSGHKRFTYRVDENGFYRLETTR 400
            .:|.|.:........|.|.||.:
Zfish   383 HTGDKPYKCSHCSKRFTRSETLK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/16 (25%)
C2H2 Zn finger 207..225 CDD:275368 6/17 (35%)
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 263..284 CDD:275368 9/20 (45%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
LOC108182721XP_021326715.1 COG5048 53..415 CDD:227381 93/386 (24%)
C2H2 Zn finger 55..75 CDD:275368 3/19 (16%)
C2H2 Zn finger 83..103 CDD:275368 4/25 (16%)
C2H2 Zn finger 111..131 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 6/32 (19%)
C2H2 Zn finger 167..187 CDD:275368 5/21 (24%)
C2H2 Zn finger 195..215 CDD:275368 7/21 (33%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 9/20 (45%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
C2H2 Zn finger 307..327 CDD:275368 2/19 (11%)
C2H2 Zn finger 335..355 CDD:275368 4/20 (20%)
C2H2 Zn finger 391..411 CDD:275368 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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