DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC100537361

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_003198540.5 Gene:LOC100537361 / 100537361 -ID:- Length:911 Species:Danio rerio


Alignment Length:260 Identity:73/260 - (28%)
Similarity:109/260 - (41%) Gaps:41/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 FRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHIS 197
            |.|  |.|.:.|........|:           :|...|:|.| |  ..|.|.......|.:||.
Zfish   399 FTC--TQCGKSFRQASSLNKHM-----------RTHTGEKPFT-C--TQCGKSFNRSSHLNQHIR 447

  Fly   198 THSNKKQVACFHCGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHV--NC 260
            .|:.:|.:.|..||:.||..::|:.|:|  .......|.|.||.|.|:.......|:..|.  ..
Zfish   448 IHTGEKPITCTQCGKSFRQSSSLYKHMR--IHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKP 510

  Fly   261 YKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHP-- 323
            ..||.|..:...:|||..|:|. |..:||..|::|.....:.|.|.||::|      |..|.|  
Zfish   511 ITCTQCGKSFHQSSSLYKHMRI-HTGEKPFTCTQCGKSFRQASSLNKHMRI------HTGEKPIT 568

  Fly   324 --DCHYSVRTYTQMRRHFLEVH-GNNPILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 385
              .|..|.|..:.:.:| :.:| |..|  :.|..|.:.|:...||:.|:      |:.:|.|.||
Zfish   569 CTQCGKSFRQSSSLYKH-MRIHTGEKP--FTCTQCGKSFRQTSSLNKHM------RIHTGEKPFT 624

  Fly   386  385
            Zfish   625  624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..284 CDD:275368 8/20 (40%)
C2H2 Zn finger 292..311 CDD:275368 6/18 (33%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
LOC100537361XP_003198540.5 C2H2 Zn finger 37..53 CDD:275368
C2H2 Zn finger 61..81 CDD:275368
zf-H2C2_2 73..96 CDD:316026
C2H2 Zn finger 89..109 CDD:275368
C2H2 Zn finger 117..137 CDD:275368
COG5048 141..557 CDD:227381 49/176 (28%)
C2H2 Zn finger 145..165 CDD:275368
C2H2 Zn finger 173..193 CDD:275368
C2H2 Zn finger 205..225 CDD:275368
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 261..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 317..337 CDD:275368
C2H2 Zn finger 345..365 CDD:275368
C2H2 Zn finger 373..393 CDD:275368
C2H2 Zn finger 401..421 CDD:275368 5/32 (16%)
COG5048 425..865 CDD:227381 65/221 (29%)
C2H2 Zn finger 429..449 CDD:275368 6/21 (29%)
C2H2 Zn finger 457..477 CDD:275368 8/21 (38%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
C2H2 Zn finger 513..533 CDD:275368 8/20 (40%)
C2H2 Zn finger 541..561 CDD:275368 7/25 (28%)
C2H2 Zn finger 569..589 CDD:275368 4/20 (20%)
C2H2 Zn finger 597..617 CDD:275368 7/25 (28%)
C2H2 Zn finger 625..645 CDD:275368 73/260 (28%)
C2H2 Zn finger 653..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
C2H2 Zn finger 709..729 CDD:275368
C2H2 Zn finger 737..757 CDD:275368
C2H2 Zn finger 765..785 CDD:275368
C2H2 Zn finger 793..813 CDD:275368
C2H2 Zn finger 821..841 CDD:275368
C2H2 Zn finger 849..869 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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