DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC100498204

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_002934624.3 Gene:LOC100498204 / 100498204 -ID:- Length:1111 Species:Xenopus tropicalis


Alignment Length:502 Identity:101/502 - (20%)
Similarity:153/502 - (30%) Gaps:178/502 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AHAEHTEHQCTWNSCDFRTENQVEFERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEKL 126
            :..:|.|.....||.|.:||......:.|.. |:..:|.:|.:                |..:|.
 Frog   237 SETKHEEININSNSPDGKTEVDDTKGKESNL-GHVTDLSVQSE----------------RTTQKE 284

  Fly   127 PALGQNFRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYR 191
            .   :.|.|  .||.:.|..    :..::.|       |:|...|: ..||  ..|.|..|.|..
 Frog   285 Q---KRFLC--IDCGKRFTR----KSSLIVH-------QRTHTGEK-LFMC--TECGKRFGLKSS 330

  Fly   192 LIEHISTHSNKKQVACFHCGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFA-TKKLL---KS 252
            |:.||.||:.|....|..||:.|...|:.|.|  ::.......:.|:||.|.|: |.:||   ||
 Frog   331 LVRHIRTHTPKTLNICPECGKCFSRYTSFFQH--QKSHRLQKPYTCSQCDKSFSRTSQLLVHQKS 393

  Fly   253 H-------VVRH---VNC----------------YKCTMCDMTCSSASSLTTHIRYR-------- 283
            |       .::|   |.|                :.|..|..|.....||..|.|..        
 Frog   394 HRSGKEIDKIQHRENVRCQTKRRNVSRFDRFQETHACLECSKTFRQKESLLRHQRIHTVDQIDQF 458

  Fly   284 ----------------------------------------------------------------- 283
                                                                             
 Frog   459 LPHPDTTDTKTTSTILKVIYEDEASVKPGNPKDGAKKSSNECKEISLERTGQAVSLNEEKRCLCI 523

  Fly   284 ------------------HLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDCHYSVR 330
                              |..:|...|:||..|...:|.|.:|::....||::.|  |||.....
 Frog   524 DCGKSFTRKSSLIVHQRIHTGEKLYMCTECGKRFGLKSSLVRHLRTHIPKTLNIC--PDCGKCFS 586

  Fly   331 TYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFTYRVDENGF-- 393
            .|:.:.:| ..||..:. .|.|..|::.|.....|..|.....|       :|:..|.:..|.  
 Frog   587 RYSSLFQH-QRVHKRDK-QYKCSPCDKSFSRPSQLLLHQRNHKG-------ERYAERKEPEGTCA 642

  Fly   394 ---YRLETTRLESLEVTQQILSPQVNDSLAKPGTGSCYEIVDPTNTE 437
               |...|   ||....:..|..|...|.::....:.:|.:...|.|
 Frog   643 QDKYHGNT---ESDTTEKSHLCLQCGKSFSEAAALNRHEKIHTDNNE 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 7/16 (44%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 11/30 (37%)
C2H2 Zn finger 263..284 CDD:275368 7/111 (6%)
C2H2 Zn finger 292..311 CDD:275368 7/18 (39%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
LOC100498204XP_002934624.3 SUF4-like 66..>122 CDD:411020
COG5048 67..398 CDD:227381 52/198 (26%)
C2H2 Zn finger 69..90 CDD:411020
C2H2 Zn finger 69..89 CDD:275368
C2H2 Zn finger 97..117 CDD:275368
C2H2 Zn finger 97..115 CDD:411020
C2H2 Zn finger 125..145 CDD:275368
C2H2 Zn finger 153..173 CDD:275368
C2H2 Zn finger 290..310 CDD:275368 6/32 (19%)
C2H2 Zn finger 318..338 CDD:275368 8/21 (38%)
C2H2 Zn finger 346..366 CDD:275368 7/21 (33%)
C2H2 Zn finger 374..394 CDD:275370 9/19 (47%)
C2H2 Zn finger 430..450 CDD:275368 7/19 (37%)
COG5048 522..>821 CDD:227381 39/179 (22%)
C2H2 Zn finger 522..542 CDD:275368 0/19 (0%)
C2H2 Zn finger 550..570 CDD:275368 7/19 (37%)
C2H2 Zn finger 578..598 CDD:275368 6/22 (27%)
C2H2 Zn finger 606..626 CDD:275368 5/19 (26%)
C2H2 Zn finger 661..681 CDD:275368 3/19 (16%)
C2H2 Zn finger 770..790 CDD:275368
C2H2 Zn finger 798..818 CDD:275368
C2H2 Zn finger 826..846 CDD:275368
SUF4-like 1019..>1070 CDD:411020
C2H2 Zn finger 1022..1043 CDD:411020
C2H2 Zn finger 1022..1042 CDD:275368
C2H2 Zn finger 1050..1070 CDD:411020
C2H2 Zn finger 1050..1070 CDD:275368
C2H2 Zn finger 1077..1097 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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