DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17829 and znf628

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_002941933.2 Gene:znf628 / 100489381 XenbaseID:XB-GENE-5996090 Length:1095 Species:Xenopus tropicalis


Alignment Length:451 Identity:105/451 - (23%)
Similarity:159/451 - (35%) Gaps:116/451 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ELELTCGWRDCQEICTGEWSLNGHIGDHLEHYAKAQDDRGAHAEHTEHQCTWNSCDFRTENQVEF 86
            |:...||  ||:.....|..|.||...|:|..               :.||  :||...:|....
 Frog   275 EMVFKCG--DCEMTFKNEDLLLGHQQTHVEQI---------------YPCT--NCDKTFKNPSGL 320

  Fly    87 ERHSYYHGYYLNLLLQGKLECDLHPEIPACTAPARLMEKLPALGQNFRCGWTDCEREFVSIVEFQ 151
            .||:.:                       |.:..|          .|:|  :.||:.||.:....
 Frog   321 SRHNQH-----------------------CHSSER----------PFKC--SICEKTFVQLSNLL 350

  Fly   152 DHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHI----STHSNKKQVACFHCGE 212
            .|...|...:..||...|...|:|.              .:|:..    :|.:..:|..|..||:
 Frog   351 VHQRTHTEEQQFIQTEAEVTCPQTS--------------EIIQPSTATPATETVDRQYKCTECGK 401

  Fly   213 LFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRH--VNCYKCTMCDMTCSSASS 275
            :|:..:.|..|:|  .......::|::|.|.|....||..|...|  |..:||..|.:|...:|.
 Frog   402 VFKGTSGLRYHMR--DHTGERPYKCSECGKAFKRSSLLSIHQRVHTGVRAFKCAECGLTFKWSSH 464

  Fly   276 LTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHP-DCHYSVRTYTQ---MR 336
            ...|:| :|..::|..|::|.......|.|.:|.|:      |..|.| .|....:|:||   :|
 Frog   465 YQYHLR-QHTGERPYTCTDCGKSFKNTSCLRRHRQL------HTGERPFTCLMCGKTFTQTSNLR 522

  Fly   337 RHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHGFRLPSGHKRFTYRVDENGFY------- 394
            :|.....|..|  |.|..|::.|....:|..|.      |..|..|.|...|....|.       
 Frog   523 QHERTHTGERP--YKCDKCDKSFTHSSNLQLHQ------RTHSSDKPFKCTVCGKSFVMSSYLQR 579

  Fly   395 ----RLETTRLESLEVTQQILSPQVNDSLA-KPGTGSCYEIVD--PTNTEFERIIVSNDPN 448
                .:..|.:.:...||.|.:.|....|. .||.    :|:.  |....||.   ||.|:
 Frog   580 HLRTHVSATLVTTENSTQNIQNSQNIQVLPNNPGV----QIIPSMPAPLTFEG---SNQPS 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 1/20 (5%)
C2H2 Zn finger 207..225 CDD:275368 6/17 (35%)
C2H2 Zn finger 237..257 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
znf628XP_002941933.2 C2H2 Zn finger 34..54 CDD:275368
zf-H2C2_2 46..70 CDD:404364
C2H2 Zn finger 62..82 CDD:275368
zf-H2C2_2 74..99 CDD:404364
C2H2 Zn finger 90..110 CDD:275368
C2H2 Zn finger 118..138 CDD:275368
COG5048 142..576 CDD:227381 90/385 (23%)
C2H2 Zn finger 146..166 CDD:275368
C2H2 Zn finger 174..194 CDD:275368
C2H2 Zn finger 202..222 CDD:275368
C2H2 Zn finger 230..250 CDD:275368
C2H2 Zn finger 280..300 CDD:275368 8/21 (38%)
C2H2 Zn finger 307..328 CDD:275370 7/45 (16%)
C2H2 Zn finger 336..356 CDD:275368 6/21 (29%)
C2H2 Zn finger 396..416 CDD:275368 7/21 (33%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 6/20 (30%)
C2H2 Zn finger 480..500 CDD:275368 6/25 (24%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 536..556 CDD:275368 6/25 (24%)
C2H2 Zn finger 564..584 CDD:275368 2/19 (11%)
SP1-4_N <586..>840 CDD:425404 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.