DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17829 and asb8

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_002932471.1 Gene:asb8 / 100486931 XenbaseID:XB-GENE-6049046 Length:280 Species:Xenopus tropicalis


Alignment Length:109 Identity:28/109 - (25%)
Similarity:40/109 - (36%) Gaps:22/109 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 VRHVNCYKCTMCD---MTCSSASSLT-----------THIRYRHLKDKPL--KCSECDTRCVRES 303
            ::|.| .||:|.:   .|.||..||.           ..:...|....||  .|..||..||.. 
 Frog     1 MQHFN-RKCSMPERLIRTISSIRSLPGDSVESLIRKGADVNCPHDTLMPLHSACMVCDPDCVEL- 63

  Fly   304 DLAKHVQIVHSKTVHQCEHPDCHYSVRTYTQMRRHFLEVHGNNP 347
             |.::...|.|:..:|  ....||:...........:| :|.||
 Frog    64 -LLENGAHVDSQDGYQ--RTALHYAAEKDVTCVEILIE-YGANP 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368
C2H2 Zn finger 207..225 CDD:275368
C2H2 Zn finger 237..257 CDD:275368 0/1 (0%)
C2H2 Zn finger 263..284 CDD:275368 7/34 (21%)
C2H2 Zn finger 292..311 CDD:275368 6/18 (33%)
C2H2 Zn finger 352..373 CDD:275368
asb8XP_002932471.1 PHA02876 <27..>179 CDD:165207 18/82 (22%)
ANK repeat 48..75 CDD:293786 10/28 (36%)
ANK repeat 79..107 CDD:293786 6/26 (23%)
ANK repeat 109..140 CDD:293786
ANK repeat 142..173 CDD:293786
SOCS 237..279 CDD:383010
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.