DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC100486443

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_031759800.1 Gene:LOC100486443 / 100486443 -ID:- Length:1764 Species:Xenopus tropicalis


Alignment Length:460 Identity:104/460 - (22%)
Similarity:141/460 - (30%) Gaps:142/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 CDFRTENQVEFERH-----------------SYYHGYYLNLLLQGKLECDLHPEIPACTAPARLM 123
            |...|.|:..:.||                 ||.....|.|.:|      :|......|.|    
 Frog  1121 CGRVTPNKSNYLRHLRTHTGEKPYTCPECGRSYIQSSQLALHIQ------IHMGEKPYTCP---- 1175

  Fly   124 EKLPALGQNFRCGWT-----------------------DCEREFVSIVEFQDHIVKHA------- 158
                      .||.|                       :|.:.|....:...|...|.       
 Frog  1176 ----------ECGKTFSHSSQLCTHRKSHTGEKPYTCPECGKTFSHSSQLCTHRKSHTGEKPYTC 1230

  Fly   159 -----LFEYDIQ-----KTPEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNKKQVACFHCGEL 213
                 .|.:..|     |:...|:|.| |  ..|.|...:..:|..|..:|:.:|...|..||:.
 Frog  1231 PECGKTFSHSSQLCTHRKSHTGEKPYT-C--PECGKTFSHSSQLCTHRKSHTGEKPYTCPECGKT 1292

  Fly   214 FRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRHV--NCYKCTMCDMTCSSASSL 276
            |...:.|..|  |:.......:.|.:|.|.|:....|.:|...|.  ..|.|..|..|.|.:|.|
 Frog  1293 FSHSSQLCTH--RKSHTGEKPYTCPECGKTFSRSSQLCTHRKSHTGEKPYTCPECGKTFSRSSQL 1355

  Fly   277 TTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHP----DCHYSVRTYTQMRR 337
            .|| |..|..:||..|.||.....|.|.|..|      :..|..|.|    :|......|:|...
 Frog  1356 CTH-RKSHTGEKPYTCPECGKTFSRSSQLCTH------RKSHTGEKPFSCRECGKRFGRYSQALI 1413

  Fly   338 HFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKHG---FRLPSGHKRFTYRVDENGFYRLETT 399
            |.....|..|  |||..|.:.|...|.|:.|.|...|   |..|...|.|              .
 Frog  1414 HLRSHTGEKP--YACPQCAKAFGDKKHLTRHQMSHSGERPFPCPRCGKSF--------------R 1462

  Fly   400 RLESLEVTQQILSPQVNDSLAKPGTGSCYEIVDPTNTEFER--------------IIVSNDPNEA 450
            |.|.|...|::..|.            |:  ::||....:|              .:|.|:....
 Frog  1463 RKEHLSRHQKMRGPH------------CF--LNPTKGRQKREWTWHLHAKPKAPGPVVGNEVAPL 1513

  Fly   451 QLMGE 455
            .|.||
 Frog  1514 YLGGE 1518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/16 (25%)
C2H2 Zn finger 207..225 CDD:275368 6/17 (35%)
C2H2 Zn finger 237..257 CDD:275368 6/19 (32%)
C2H2 Zn finger 263..284 CDD:275368 9/20 (45%)
C2H2 Zn finger 292..311 CDD:275368 7/18 (39%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
LOC100486443XP_031759800.1 KRAB 8..47 CDD:396083
eNOPS_SF 291..>324 CDD:414955
C2H2 Zn finger 663..683 CDD:275368
COG5048 687..>987 CDD:227381
C2H2 Zn finger 691..711 CDD:275368
C2H2 Zn finger 719..739 CDD:275368
C2H2 Zn finger 747..767 CDD:275368
C2H2 Zn finger 775..795 CDD:275368
C2H2 Zn finger 803..823 CDD:275368
C2H2 Zn finger 915..935 CDD:275368
COG5048 938..1386 CDD:227381 66/290 (23%)
C2H2 Zn finger 943..963 CDD:275368
C2H2 Zn finger 971..988 CDD:275368
C2H2 Zn finger 1118..1138 CDD:275368 5/16 (31%)
C2H2 Zn finger 1146..1166 CDD:275368 5/25 (20%)
C2H2 Zn finger 1174..1194 CDD:275368 4/33 (12%)
C2H2 Zn finger 1202..1222 CDD:275368 3/19 (16%)
C2H2 Zn finger 1230..1250 CDD:275368 3/19 (16%)
C2H2 Zn finger 1258..1278 CDD:275368 5/21 (24%)
C2H2 Zn finger 1286..1306 CDD:275368 7/21 (33%)
COG5048 1292..1723 CDD:227381 68/266 (26%)
C2H2 Zn finger 1314..1334 CDD:275368 6/19 (32%)
C2H2 Zn finger 1342..1362 CDD:275368 9/20 (45%)
C2H2 Zn finger 1370..1390 CDD:275368 7/25 (28%)
C2H2 Zn finger 1398..1418 CDD:275368 4/19 (21%)
C2H2 Zn finger 1426..1446 CDD:275368 7/19 (37%)
C2H2 Zn finger 1454..1472 CDD:275368 6/31 (19%)
C2H2 Zn finger 1567..1587 CDD:275368
C2H2 Zn finger 1595..1615 CDD:275368
C2H2 Zn finger 1623..1643 CDD:275368
C2H2 Zn finger 1651..1671 CDD:275368
C2H2 Zn finger 1679..1699 CDD:275368
C2H2 Zn finger 1707..1727 CDD:275368
zf-H2C2_2 1720..1744 CDD:404364
C2H2 Zn finger 1735..1754 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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