DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and LOC100485062

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_031760308.1 Gene:LOC100485062 / 100485062 -ID:- Length:629 Species:Xenopus tropicalis


Alignment Length:427 Identity:106/427 - (24%)
Similarity:181/427 - (42%) Gaps:80/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GDH-----LEHYAKAQDDRGAHAEHTEHQCTWNSCD----FRTENQVEFERHSYYHGYYLNLLLQ 102
            |||     .:.| |.:.|    |:..|.:...|.|:    ::||...:.|...:.          
 Frog   141 GDHCIFQTTDTY-KIEPD----AQTKESRFDSNQCESMHMYKTEPDAQSEGDCFV---------- 190

  Fly   103 GKLECDLHPEIPACTAPARLMEKLPALGQNFRCGWTDCEREFVSIVEFQDHIVKHALFEYDIQKT 167
            .|.|...:.|:.| :...|..||      .|.|  ..|.:.:....|.:.|...|:         
 Frog   191 SKCETTDNRELDA-SLETRTEEK------PFAC--NSCGKSYRDEHELKAHSRSHS--------- 237

  Fly   168 PEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNKKQVACFHCGELFRTKTTLFDHLRRQPENNT 232
              .|| :.:|  :.|.|....|.:|.:|:.||:.:|...|..||:.:|.|:.|.||  ::...:.
 Frog   238 --GER-RFVC--SECGKSFKAKCKLDDHLRTHTGEKPFTCSECGKCYRRKSDLVDH--KKVHTHK 295

  Fly   233 NSFQCAQCFKFFATKKLLKSHVVRHV-NCYKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECD 296
            |||.|.:|.|.:|:|:.||:|:..|. |.::||.|..:....|||..| :..|..:||.:|::|.
 Frog   296 NSFICPECGKSYASKRNLKAHLNVHTGNTFQCTECGKSFPKKSSLQRH-QMVHTGEKPFECTDCG 359

  Fly   297 TRCVRESDLAKHVQIVHS-KTVHQCEHPDCHYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFK 360
            .....:.:|.:| |::|: :..::|  .:|....|..:::..|:|...|..|  ::|..|.:.:.
 Frog   360 KLFPFKKNLLRH-QMIHTGEKPYEC--TECGKHFRYKSRLNIHYLVHAGVKP--FSCSECGKQYT 419

  Fly   361 SGKSLSAHLMKKHG------------FRLPSGHK-RFTYRVDENGFYRLETTRLESLEVTQQI-L 411
            |..:|..||:...|            ||:..|.: .......|..|..:|..  |:..|.|.: |
 Frog   420 SRYALDYHLLTHTGEKPFVCTECGKAFRVRQGLRLHLQCHTGEKPFLCIECG--EAFRVRQSLRL 482

  Fly   412 SPQVNDS---LAKPGTGSCYEIVDPTNTEFERIIVSN 445
            ..|.:..   ...|..|:|:.    ...|.:|.:||:
 Frog   483 HLQFHTGEKPFPCPECGACFR----RKVELQRHLVSH 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..225 CDD:275368 8/17 (47%)
C2H2 Zn finger 237..257 CDD:275368 8/19 (42%)
C2H2 Zn finger 263..284 CDD:275368 7/20 (35%)
C2H2 Zn finger 292..311 CDD:275368 4/18 (22%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
LOC100485062XP_031760308.1 C2H2 Zn finger 50..70 CDD:275368
C2H2 Zn finger 77..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
COG5048 212..597 CDD:227381 87/340 (26%)
C2H2 Zn finger 216..236 CDD:275368 4/21 (19%)
C2H2 Zn finger 244..264 CDD:275368 6/21 (29%)
C2H2 Zn finger 272..292 CDD:275368 8/21 (38%)
C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
C2H2 Zn finger 327..347 CDD:275368 7/20 (35%)
C2H2 Zn finger 355..375 CDD:275368 5/20 (25%)
C2H2 Zn finger 383..403 CDD:275368 5/21 (24%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
C2H2 Zn finger 439..459 CDD:275368 3/19 (16%)
C2H2 Zn finger 467..487 CDD:275368 6/21 (29%)
C2H2 Zn finger 495..515 CDD:275368 6/23 (26%)
C2H2 Zn finger 523..543 CDD:275368
C2H2 Zn finger 551..571 CDD:275368
C2H2 Zn finger 579..599 CDD:275368
C2H2 Zn finger 607..627 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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