DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and znf1079

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_005159263.2 Gene:znf1079 / 100333893 ZFINID:ZDB-GENE-110913-68 Length:332 Species:Danio rerio


Alignment Length:361 Identity:90/361 - (24%)
Similarity:139/361 - (38%) Gaps:93/361 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EHTEHQCTWNSCDFRTENQVEFERH---------------SYYHGYYLNLLLQGKLECD------ 108
            |.|.|   ||    :||.: :||:|               |...|.:     :.|..|:      
Zfish     5 EETHH---WN----KTEEK-QFEKHQETTTDEKPTLTEKTSSCGGPW-----KSKSACNFTCLQC 56

  Fly   109 -----------LHPEIPACTAPARLMEKLPALGQNF----------------RCGWT--DCEREF 144
                       :|..:.....|    ...|..|::|                || :|  .|.:.|
Zfish    57 GNCFTRKHNLQVHMRVHTGEKP----YSCPQCGKSFKQNGYLKVHMRTHTGERC-YTCQQCGQRF 116

  Fly   145 VSIVEFQDHIVKHALFEYDIQKTPEDERPKTMCNWAMCHKHMGNKYRLIEHISTHSNKKQVACFH 209
            .:...|..|:..|.           .|||.| |  ..|.|.:.....|..|:..|:.:|..:|..
Zfish   117 YTTGNFAQHMRIHT-----------GERPYT-C--LQCGKSLYQSANLAAHMRIHTVEKPYSCIQ 167

  Fly   210 CGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKKLLKSHVVRH--VNCYKCTMCDMTCSS 272
            ||:.|:..:||..|:|  ..|:...|.|.||.|.||.|:.|:.|:..|  ...|.||.|..:...
Zfish   168 CGKSFKQNSTLEAHIR--AHNDGRIFSCQQCGKSFAQKQDLEIHMRIHSGKKPYTCTECGKSFRF 230

  Fly   273 ASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDCHYSVRTYTQMRR 337
            .|:|..|: ..|.::||..|::|......:|.|..|:.:.....|..|:  .|..|:.....::.
Zfish   231 KSTLKQHM-ISHTREKPFTCAQCGRSFTTKSSLMNHMNVHTGTIVFTCD--QCGKSLTRKDSIKN 292

  Fly   338 HFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKH 373
            | ::.|...  .::|..|.:.|||.:||:.| ||.|
Zfish   293 H-MKTHSVE--RFSCCECGKSFKSERSLNTH-MKLH 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 4/16 (25%)
C2H2 Zn finger 207..225 CDD:275368 7/17 (41%)
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 263..284 CDD:275368 6/20 (30%)
C2H2 Zn finger 292..311 CDD:275368 5/18 (28%)
C2H2 Zn finger 352..373 CDD:275368 10/20 (50%)
znf1079XP_005159263.2 C2H2 Zn finger 53..73 CDD:275368 1/19 (5%)
zf-H2C2_2 65..90 CDD:290200 5/28 (18%)
C2H2 Zn finger 81..101 CDD:275368 3/19 (16%)
C2H2 Zn finger 109..129 CDD:275368 4/19 (21%)
C2H2 Zn finger 137..157 CDD:275368 5/21 (24%)
zf-H2C2_2 149..174 CDD:290200 8/24 (33%)
COG5048 <161..320 CDD:227381 49/166 (30%)
C2H2 Zn finger 165..185 CDD:275368 8/21 (38%)
C2H2 Zn finger 193..213 CDD:275368 9/19 (47%)
zf-H2C2_2 205..228 CDD:290200 7/22 (32%)
C2H2 Zn finger 221..241 CDD:275368 6/20 (30%)
zf-H2C2_2 234..258 CDD:290200 7/24 (29%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
zf-C2H2_2 252..>322 CDD:289522 18/75 (24%)
C2H2 Zn finger 277..297 CDD:275368 4/22 (18%)
C2H2 Zn finger 304..324 CDD:275368 10/20 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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