DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17829 and si:ch211-222k6.1

DIOPT Version :9

Sequence 1:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_021324960.1 Gene:si:ch211-222k6.1 / 100034531 ZFINID:ZDB-GENE-050208-649 Length:674 Species:Danio rerio


Alignment Length:465 Identity:109/465 - (23%)
Similarity:161/465 - (34%) Gaps:128/465 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NGHIGDHLEHYAKAQDDRGAHAEHTEHQCTWNSCDFRTENQVEFE----RHSYYHGYYLNLLLQ- 102
            ||..|:.||...|.||..|..:         .|..|::..:|.|.    ..|:.....|||.:: 
Zfish    24 NGETGEQLEAVEKHQDTHGQKS---------TSLSFQSRPEVHFTCPQCGKSFSCEQSLNLHMKF 79

  Fly   103 ----GKLECDL-------------HPEI---------PACTAPARLMEKLPA-----LGQN-FRC 135
                ...|||.             |.:|         ..|.....|.|:|..     .|:. |.|
Zfish    80 HRGTKPYECDQCDKIFTLKTNLNEHMKIHNVDMLYTCDQCGKSFLLKERLNKHLKIHTGEKPFTC 144

  Fly   136 GWTDCEREFVSIVEFQDHIVKHA------------LFEY-----DIQKTPEDERPKTMCNWAMCH 183
              ..|.:.|:......:||..|.            .|.|     |..|....|||......|...
Zfish   145 --DQCGKNFLHKGYLTEHIKIHTGEKPHTCDQCGKRFAYKGNLTDHMKVHTGERPYACDQCAKRF 207

  Fly   184 KHMGNKYRLIEHISTHSNKKQVACFHCGELFRTKTTLFDHLRRQPENNTNSFQCAQCFKFFATKK 248
            ||.||   ||||:..|:.::..:|..||:.|:.|..|.||:|  .......|.|.:|.:.:..|:
Zfish   208 KHKGN---LIEHVKIHTGERPYSCDQCGKKFKLKHILSDHMR--IHTGEKPFTCEKCGRSYTRKR 267

  Fly   249 LLKSHVVRH--VNCYKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQI 311
            .|..|:..|  |..:.|..|..:.........|:| .|.:::|..|.:|....:|...|      
Zfish   268 NLSDHMKSHTGVKLHTCDQCGKSFVKTGVFKVHLR-THSRERPFNCDQCGKDFLRMGTL------ 325

  Fly   312 VHSKTVHQCEHPD-----CHYSVRTYTQMRRHFLEVH-----GNNPILYACHCCERFFKSGKSLS 366
                .|||..|..     |....:|:  .|...|:||     |..|  :.|..||:.||     .
Zfish   326 ----KVHQKRHSGIKDHICSECGKTF--FRDSELKVHQSVHTGEKP--FKCSHCEKTFK-----R 377

  Fly   367 AHLMKKHGFRLPSGH---------KRFTYRVDENGFYRLETTRLESLEVTQQILSPQVNDSLAKP 422
            |..||.|. ::.:|.         |:|.::.:.|...: ..||::.....|              
Zfish   378 AEYMKMHR-KIHTGEKPYECEKCGKKFRHKGNFNDHVK-NHTRIKPFSCDQ-------------- 426

  Fly   423 GTGSCYEIVD 432
             .|.|:.:.|
Zfish   427 -CGKCFRLKD 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 8/16 (50%)
C2H2 Zn finger 207..225 CDD:275368 8/17 (47%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 263..284 CDD:275368 4/20 (20%)
C2H2 Zn finger 292..311 CDD:275368 4/18 (22%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
si:ch211-222k6.1XP_021324960.1 C2H2 Zn finger 60..80 CDD:275368 4/19 (21%)
C2H2 Zn finger 88..108 CDD:275368 3/19 (16%)
C2H2 Zn finger 116..136 CDD:275368 4/19 (21%)
C2H2 Zn finger 144..164 CDD:275368 5/21 (24%)
zf-H2C2_2 156..181 CDD:316026 4/24 (17%)
C2H2 Zn finger 172..192 CDD:275368 4/19 (21%)
COG5048 196..607 CDD:227381 70/282 (25%)
C2H2 Zn finger 200..220 CDD:275368 9/22 (41%)
C2H2 Zn finger 228..248 CDD:275368 9/21 (43%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 4/20 (20%)
C2H2 Zn finger 312..332 CDD:275368 7/29 (24%)
C2H2 Zn finger 340..360 CDD:275368 6/21 (29%)
C2H2 Zn finger 368..388 CDD:275368 9/25 (36%)
C2H2 Zn finger 396..416 CDD:275368 3/20 (15%)
C2H2 Zn finger 424..444 CDD:275368 4/27 (15%)
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
C2H2 Zn finger 536..556 CDD:275368
C2H2 Zn finger 564..584 CDD:275368
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..666 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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