DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NF2 and nf2

DIOPT Version :9

Sequence 1:NP_000259.1 Gene:NF2 / 4771 HGNCID:7773 Length:595 Species:Homo sapiens
Sequence 2:XP_012820654.1 Gene:nf2 / 779815 XenbaseID:XB-GENE-984959 Length:594 Species:Xenopus tropicalis


Alignment Length:602 Identity:528/602 - (87%)
Similarity:562/602 - (93%) Gaps:15/602 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQ 65
            |||||||||:|:||||||||||.|||:||||||||||||||||||||||||||||||||||||||
 Frog     1 MAGAIASRMNFTSLKRKQPKTFIVRIITMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQ 65

Human    66 YTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEK 130
            ||:|||:||||||||||||||.|||||||||||||||||.||||||:|||||||||||||||:||
 Frog    66 YTVKDTIAWLKMDKKVLDHDVPKEEPVTFHFLAKFYPENVEEELVQDITQHLFFLQVKKQILEEK 130

Human   131 IYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEH 195
            ||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||
 Frog   131 IYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAEEELLPKRVINLYQMTPEMWEERITAWYAEH 195

Human   196 RGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNE 260
            |||.||||||||||||||.||||||||.||||||||||||||||||||||.|||||||.||||||
 Frog   196 RGRTRDEAEMEYLKIAQDTEMYGVNYFLIRNKKGTELLLGVDALGLHIYDLENRLTPKTSFPWNE 260

Human   261 IRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMKAQA 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   261 IRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMKAQA 325

Human   326 REEKARKQMERQRLAREKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQI 390
            |||||||||||||||||||:||||||.||||||||||:||||.|||:||||||||||||||||||
 Frog   326 REEKARKQMERQRLAREKQLREEAERARDELERRLLQLKEEAQMANDALMRSEETADLLAEKAQI 390

Human   391 TEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMAEESERRAKEADQLK 455
            ||||||||||||||||||||||||||||.|||||||||||:|.|:||:|||||||||.|||:|||
 Frog   391 TEEEAKLLAQKAAEAEQEMQRIKATAIRNEEEKRLMEQKVMETEMLAIKMAEESERRVKEAEQLK 455

Human   456 QDLQEAREAERRAKQKLLEIATKPTY-------PPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTD 513
            |||||||::|||||||||||::|.:|       ...:.:|   |.|:|||:::.|||.:||||||
 Frog   456 QDLQEARDSERRAKQKLLEISSKTSYMQAAGAASSSSTVP---PTDVPSFSMLSDSLPYDFKDTD 517

Human   514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIK 578
            |||||||||||||||||||:||||||||||||||:|||||||:|:||:| ||:    .||.||||
 Frog   518 MKRLSMEIEKEKVEYMEKSRHLQEQLNELKTEIESLKLKERESAMDIMH-ENA----GSKQNTIK 577

Human   579 KLTLQSAKSRVAFFEEL 595
            ||||||.:.||||||||
 Frog   578 KLTLQSTQCRVAFFEEL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NF2NP_000259.1 B41 23..222 CDD:214604 187/198 (94%)
FERM_C_ERM 216..312 CDD:270015 92/95 (97%)
PLN03086 307..>367 CDD:178635 56/59 (95%)
ERM 347..595 CDD:366293 197/254 (78%)
nf2XP_012820654.1 B41 24..222 CDD:214604 187/197 (95%)
FERM_C_ERM 216..312 CDD:270015 92/95 (97%)
PLN03086 307..>369 CDD:178635 58/61 (95%)
ERM 347..594 CDD:366293 197/254 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 341 1.000 Domainoid score I7791
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2180
Inparanoid 1 1.050 929 1.000 Inparanoid score I3503
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133350at32523
OrthoFinder 1 1.000 - - FOG0006349
OrthoInspector 1 1.000 - - oto147764
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4654
SonicParanoid 1 1.000 - - X4049
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

Return to query results.
Submit another query.