DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpo1 and SDP6

DIOPT Version :9

Sequence 1:NP_001097332.1 Gene:Gpo1 / 47611 FlyBaseID:FBgn0022160 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_187648.1 Gene:SDP6 / 820199 AraportID:AT3G10370 Length:629 Species:Arabidopsis thaliana


Alignment Length:570 Identity:285/570 - (50%)
Similarity:386/570 - (67%) Gaps:33/570 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TLPPRADQIKSLM---SGEEFDVLIIGGGATGAGCALDSVTRGLKTALVELDDFASGTSSRSTKL 108
            ::|.|:.|..:|:   :.:..|||:|||||||:|.|||:|||||:..|||.:||:||||||||||
plant    54 SVPSRSAQESALIAATASDPLDVLVIGGGATGSGVALDAVTRGLRVGLVEREDFSSGTSSRSTKL 118

  Fly   109 IHGGVRYLQKAILGLDLEQYRMVKEALAERATMLESAPHLTHPLPIMLPVYTWWQVPYYWVGIKA 173
            ||||||||:||:..||..|.::|..||.||..::|:||||.|.||.|.|.:.|::|.|:|:|:|.
plant   119 IHGGVRYLEKAVFNLDYGQLKLVFHALEERKQLIENAPHLCHALPCMTPCFDWFEVIYFWMGLKM 183

  Fly   174 YDLVAGDRNVKSSYYLSKKDALELFPMLK---KDK-LCGAIVYYDGQQDDARMCLAVALTAARHG 234
            ||||||.|.:..|.|.|.|:::||||.|.   ||| |.|.:||||||.:|:|:.:.:|.|||..|
plant   184 YDLVAGPRLLHLSRYYSAKESIELFPTLARKGKDKNLRGTVVYYDGQMNDSRLNVGLACTAALAG 248

  Fly   235 ATVCNHVEVKELLKKDDGTGKQVLCGAKVKDHISGKEFTVKAKCIVNAAGPFTDSIRKMDNPTVK 299
            |.|.||.||..|: .||.| |::: ||:::::::|:||...||.:|||||||.||||||.:...|
plant   249 AAVLNHAEVVSLI-TDDAT-KRII-GARIRNNLTGQEFNSYAKVVVNAAGPFCDSIRKMIDEDTK 310

  Fly   300 SICCPSSGVHIVLPGYYSPDQMGLLDPSTSDGRVIFFLPWQRQTIAGTTDLPCEITHNPTPTEDE 364
            .:.|||||||||||.||||:.|||:.|.|.||||:|.|||..:|:|||||....||..|.|.|||
plant   311 PMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSNTSITSLPEPHEDE 375

  Fly   365 IQFILNEIKNYLNADVEVRRGDVLSAWSGIRPLVSDPNKDDTQSLARNHIVHVSPSNLITIAGGK 429
            |||||:.|.:|||  ::|||.||||||||||||..||....|:|::|:|:|......|:||.|||
plant   376 IQFILDAISDYLN--IKVRRTDVLSAWSGIRPLAMDPTAKSTESISRDHVVFEENPGLVTITGGK 438

  Fly   430 WTTYRAMAEHTIDAAIKACNLKPERAEAVTSYLKIEGGQGWTPT-------MYIRLVQDFG---- 483
            |||||:|||..:|||||:..|||.. |.||..|::.|..||.|:       .|:|:.:.:|    
plant   439 WTTYRSMAEDAVDAAIKSGQLKPTN-ECVTQKLQLLGSYGWEPSSFTTLAQQYVRMKKTYGGKVV 502

  Fly   484 ---LECEVAQHLAKSYGDRAFAVSKMASLTGKRWPIIGNRIHPEFPYIDAEIRYGVR-EYACTAV 544
               ::...|:||:.:||..|..|:.:|...|     :|.|:....|:::||:.|..| ||..:||
plant   503 PGAMDTAAAKHLSHAYGSMADRVATIAQEEG-----LGKRLAHGHPFLEAEVAYCARHEYCESAV 562

  Fly   545 DMIARRLRLAFLNVQAAQEALPVIVDIMGEELGWSKDEKERQIKHATEFL 594
            |.||||.|:|||:..||..||..:|:|:..|..|.|..::::::.|.|||
plant   563 DFIARRCRIAFLDTDAAARALQRVVEILASEHKWDKSRQKQELQKAKEFL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo1NP_001097332.1 PLN02464 9..594 CDD:215257 283/568 (50%)
DAO_C 458..583 CDD:293506 48/139 (35%)
EFh 624..684 CDD:238008
EF-hand_7 624..683 CDD:290234
SDP6NP_187648.1 PLN02464 1..629 CDD:215257 285/570 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 421 1.000 Domainoid score I120
eggNOG 1 0.900 - - E1_COG0578
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H352
Inparanoid 1 1.050 526 1.000 Inparanoid score I286
OMA 1 1.010 - - QHG53921
OrthoDB 1 1.010 - - D669193at2759
OrthoFinder 1 1.000 - - FOG0002536
OrthoInspector 1 1.000 - - otm3359
orthoMCL 1 0.900 - - OOG6_101157
Panther 1 1.100 - - LDO PTHR11985
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1659
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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