DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpo1 and gut2

DIOPT Version :9

Sequence 1:NP_001097332.1 Gene:Gpo1 / 47611 FlyBaseID:FBgn0022160 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_588348.1 Gene:gut2 / 2539217 PomBaseID:SPCC1223.03c Length:649 Species:Schizosaccharomyces pombe


Alignment Length:648 Identity:275/648 - (42%)
Similarity:380/648 - (58%) Gaps:59/648 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AASACV-GSVLASYTLDRWNTPHVVNNATVPPKRKRTLPP--RADQIKSLMSGEEFDVLIIGGGA 73
            |||..| |:|..|..:.|....|.  |....|..|...||  |...:|::....:||||||||||
pombe    15 AASGLVGGAVFYSDFIKRPAPSHF--NPQFTPFTKSLAPPPSRETLLKNVEDISKFDVLIIGGGA 77

  Fly    74 TGAGCALDSVTRGLKTALVELDDFASGTSSRSTKLIHGGVRYLQKAILGLDLEQYRMVKEALAER 138
            ||.|.|:|:.||||...|:|..||||.|||:|||:.|||||||:||:..|...|..:|.|||.||
pombe    78 TGTGVAVDASTRGLNVCLLEKTDFASETSSKSTKMAHGGVRYLEKAVFQLSKAQLDLVIEALNER 142

  Fly   139 ATMLESAPHLTHPLPIMLPVYTWWQVPYYWVGIKAYDLVAGDRNVKSSYYLSKKDALELFPMLKK 203
            |.||.:||||...||||:|||.||||||::||.|.||.|||.:|:::|...||:..:.:.|||..
pombe   143 ANMLRTAPHLCTVLPIMIPVYKWWQVPYFFVGCKIYDWVAGSKNLRASTIFSKETTVAIAPMLDD 207

  Fly   204 DKLCGAIVYYDGQQDDARMCLAVALTAARHGATVCNHVEVKELLKKDDGTGKQVLCGAKVKDHIS 268
            ..|..:.||:||..:|.||...:|:||..:||||.|::|||:|||..|..    |.|....|..:
pombe   208 SNLKASCVYHDGSFNDTRMNTTLAVTAIDNGATVLNYMEVKKLLKSKDNK----LEGVLAIDRET 268

  Fly   269 GKEFTVKAKCIVNAAGPFTDSIRKMD---------NPTVKSICCPSSGVHIVLPGYYSPDQMGLL 324
            |||:.:||..:|||.|||:|.|.:||         ......:..||:|||:|||.||.|..:|:|
pombe   269 GKEYQIKATSVVNATGPFSDKILEMDADPQGEPPKTAQFPRMVVPSAGVHVVLPEYYCPPNIGIL 333

  Fly   325 DPSTSDGRVIFFLPWQRQTIAGTTDLP-CEITHNPTPTEDEIQFILNEIKNYLNADVEVRRGDVL 388
            ||||||.||:||||||.:.||||||.| ..:..||||:||:||.||.|::.||...|:  |.|||
pombe   334 DPSTSDNRVMFFLPWQGKVIAGTTDKPLSSVPTNPTPSEDDIQLILKELQKYLVFPVD--REDVL 396

  Fly   389 SAWSGIRPLV---------SDPNKDDTQSLARNHIVHVSPSNLITIAGGKWTTYRAMAEHTIDAA 444
            |||.||||||         :||...:||.|.|:|.:..|.:.|:||:||||||||.|||.|::..
pombe   397 SAWCGIRPLVRDPSTVPPGTDPTTGETQGLVRSHFIFKSDTGLLTISGGKWTTYREMAEETVNEL 461

  Fly   445 IKACN----LKPERAEAVTSYLKIEGGQGWTPTMYIRLVQDFGLECEVAQHLAKSYGDRAFAVSK 505
            ||..:    |||    ..|..|.:.||:.:......||:.::.:...:|:||:.:||.||..:.:
pombe   462 IKDHDFGKALKP----CQTKKLILVGGENYYKNYSARLIHEYHIPLRLAKHLSHNYGSRAPLILE 522

  Fly   506 MASLTG-KRWPI-IGNR---------------IHPEF--PYIDAEIRYGVR-EYACTAVDMIARR 550
            :.|.|. .:.|: :.::               .:..|  |:..||::|.:: ||..|..|.:|||
pombe   523 LYSKTDFNKLPVTLADKEVFAPSSDASSDKSVSYASFDEPFTVAELKYSIKYEYTRTPTDFLARR 587

  Fly   551 LRLAFLNVQAAQEALPVIVDIMGEELGWSKDEKERQIKHATEFLANEMGHSVNRTSKERIPIK 613
            .|||||:.:.|.:|:..:..:|.||.||.....::..:.|.:::.. ||.|.:|...::..:|
pombe   588 TRLAFLDARQALQAVAGVTHVMKEEFGWDDATTDKLAQEARDYIGG-MGVSSDRFDVKQFEVK 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo1NP_001097332.1 PLN02464 9..594 CDD:215257 270/627 (43%)
DAO_C 458..583 CDD:293506 40/144 (28%)
EFh 624..684 CDD:238008
EF-hand_7 624..683 CDD:290234
gut2NP_588348.1 PLN02464 8..631 CDD:215257 270/627 (43%)
DAO_C 474..620 CDD:293506 40/145 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 376 1.000 Domainoid score I134
eggNOG 1 0.900 - - E1_COG0578
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 458 1.000 Inparanoid score I289
OMA 1 1.010 - - QHG53921
OrthoFinder 1 1.000 - - FOG0002536
OrthoInspector 1 1.000 - - otm46975
orthoMCL 1 0.900 - - OOG6_101157
Panther 1 1.100 - - LDO PTHR11985
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R509
SonicParanoid 1 1.000 - - X1659
TreeFam 1 0.960 - -
1312.860

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