DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpo1 and Gpd2

DIOPT Version :9

Sequence 1:NP_001097332.1 Gene:Gpo1 / 47611 FlyBaseID:FBgn0022160 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_036868.1 Gene:Gpd2 / 25062 RGDID:2726 Length:727 Species:Rattus norvegicus


Alignment Length:687 Identity:438/687 - (63%)
Similarity:544/687 - (79%) Gaps:19/687 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RTLPPRADQIKSLMSGEEFDVLIIGGGATGAGCALDSVTRGLKTALVELDDFASGTSSRSTKLIH 110
            |..|.|..|:.:|.:..|||:|:|||||||.|||||:|||||||||||.:|||||||||||||||
  Rat    52 REPPSREAQLMTLQNTSEFDILVIGGGATGCGCALDAVTRGLKTALVERNDFASGTSSRSTKLIH 116

  Fly   111 GGVRYLQKAILGLDLEQYRMVKEALAERATMLESAPHLTHPLPIMLPVYTWWQVPYYWVGIKAYD 175
            ||||||||||..||:||||||||||.|||.:||.||||:.|||||||:|.|||:||||||||.||
  Rat   117 GGVRYLQKAITNLDVEQYRMVKEALHERANLLEIAPHLSAPLPIMLPLYKWWQLPYYWVGIKMYD 181

  Fly   176 LVAGDRNVKSSYYLSKKDALELFPMLKKDKLCGAIVYYDGQQDDARMCLAVALTAARHGATVCNH 240
            ||||...:||||.|||..|||.||||:||||.|||||||||.:||||.||:||||||:||...|:
  Rat   182 LVAGSHCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYGAATANY 246

  Fly   241 VEVKELLKK-DDGTGKQVLCGAKVKDHISGKEFTVKAKCIVNAAGPFTDSIRKMDNPTVKSICCP 304
            :||..|||| |..|||:.:.||:.||.::|.||.|:|||::||.||||||:||||:..|..||.|
  Rat   247 MEVVSLLKKTDPETGKERVSGARCKDVLTGHEFNVRAKCVINATGPFTDSVRKMDDNDVVPICQP 311

  Fly   305 SSGVHIVLPGYYSPDQMGLLDPSTSDGRVIFFLPWQRQTIAGTTDLPCEITHNPTPTEDEIQFIL 369
            |:|||||:||||||:.||||||:||||||||||||::.|||||||.|.::||:|.|:||:|.|||
  Rat   312 SAGVHIVMPGYYSPENMGLLDPATSDGRVIFFLPWEKMTIAGTTDSPTDVTHHPIPSEDDINFIL 376

  Fly   370 NEIKNYLNADVEVRRGDVLSAWSGIRPLVSDPNKDDTQSLARNHIVHVSPSNLITIAGGKWTTYR 434
            ||::|||:.||||||||||:|||||||||:||...:|||::|||:|.||.|.|||||||||||||
  Rat   377 NEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSANTQSISRNHVVEVSDSGLITIAGGKWTTYR 441

  Fly   435 AMAEHTIDAAIKACNLK--PERAEAVTSYLKIEGGQGWTPTMYIRLVQDFGLECEVAQHLAKSYG 497
            :|||.|::.|:|..||.  |.|    |..|.::||:.|:||:|||||||:|||.||||||||:||
  Rat   442 SMAEDTVNKAVKLHNLNAGPSR----TVGLFLQGGKDWSPTLYIRLVQDYGLESEVAQHLAKTYG 502

  Fly   498 DRAFAVSKMASLTGKRWPIIGNRIHPEFPYIDAEIRYGVREYACTAVDMIARRLRLAFLNVQAAQ 562
            |:||.|:||||:||||||::|.|:..|||||:||::||::||||||||||:||.||||||||||:
  Rat   503 DKAFDVAKMASVTGKRWPVVGVRLVSEFPYIEAEVKYGIKEYACTAVDMISRRTRLAFLNVQAAE 567

  Fly   563 EALPVIVDIMGEELGWSKDEKERQIKHATEFLANEMGHSVNRTSK--ERIPIKLSKEEIQTYIKR 625
            ||||.||::||.||.||:..|:.:::.||.||..|||:. :||.:  :...|.|...:|..|.||
  Rat   568 EALPKIVELMGRELNWSELRKQEELETATRFL
YYEMGYK-SRTEQLTDSTEISLLPPDIDRYKKR 631

  Fly   626 FQLIDKDKKGYVSINDIRRALKSFGDGDVSGEQLHEILREIDTNMNGQVELDEYLQMMSAIKTGD 690
            |.:.|:|:||:::|.|::|.|:|. :..:..:.|||||.|:|.|.||||||.|:||:|||:.||.
  Rat   632 FHMFDEDEKGFITIVDVQRVLESI-NVQMDEDTLHEILCEVDLNKNGQVELHEFLQLMSAVHTGR 695

  Fly   691 VAYSRFARMAELEEQKHEAANLKQ---ISVDRSGGGL 724
            |:.||.|.:.:..|:     ||.:   |.||||.|||
  Rat   696 VSGSRLAILMKTAEE-----NLDRRVPIPVDRSCGGL 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpo1NP_001097332.1 PLN02464 9..594 CDD:215257 378/550 (69%)
DAO_C 458..583 CDD:293506 86/124 (69%)
EFh 624..684 CDD:238008 29/59 (49%)
EF-hand_7 624..683 CDD:290234 29/58 (50%)
Gpd2NP_036868.1 DAO 1..599 CDD:424372 378/550 (69%)
EFh 627..689 CDD:238008 30/62 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336565
Domainoid 1 1.000 562 1.000 Domainoid score I226
eggNOG 1 0.900 - - E1_COG0578
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H352
Inparanoid 1 1.050 865 1.000 Inparanoid score I400
OMA 1 1.010 - - QHG53921
OrthoDB 1 1.010 - - D232701at33208
OrthoFinder 1 1.000 - - FOG0002536
OrthoInspector 1 1.000 - - oto97818
orthoMCL 1 0.900 - - OOG6_101157
Panther 1 1.100 - - LDO PTHR11985
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1659
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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