DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NEUROD1 and twi

DIOPT Version :10

Sequence 1:NP_002491.3 Gene:NEUROD1 / 4760 HGNCID:7762 Length:356 Species:Homo sapiens
Sequence 2:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster


Alignment Length:94 Identity:35/94 - (37%)
Similarity:54/94 - (57%) Gaps:6/94 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    79 QKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETL 143
            :||:||..:|...|: ..:.|..:|:.||.|||.|...||.|..:|::::|.. .:.|||||:||
  Fly   341 RKPRRRLKRKPSKTE-ETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL-PSDKLSKIQTL 403

Human   144 RLAKNYIWALSEILRSGKSPDLVSFVQTL 172
            :||..||..|..:|.|..    :|.::.|
  Fly   404 KLATRYIDFLCRMLSSSD----ISLLKAL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEUROD1NP_002491.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 6/14 (43%)
bHLH_TS_NeuroD1 75..160 CDD:381562 32/80 (40%)
Nuclear localization signal. /evidence=ECO:0000255 87..93 1/5 (20%)
Neuro_bHLH 160..284 CDD:463621 2/13 (15%)
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/58 (45%)

Return to query results.
Submit another query.