DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and PKC1

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_009445.2 Gene:PKC1 / 852169 SGDID:S000000201 Length:1151 Species:Saccharomyces cerevisiae


Alignment Length:765 Identity:193/765 - (25%)
Similarity:281/765 - (36%) Gaps:313/765 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 IYRRGA--RRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLV 543
            ::|.||  .|..:::..:||.|..|.|.....||||.|   .|...||:|..||.|.||||:..|
Yeast   396 LHRHGAIINRKEEIFEQHGHHFVQKSFYNIMCCAYCGD---FLRYTGFQCQDCKFLCHKKCYTNV 457

  Fly   544 QKHC-------TDQPEPLV---------------------------------------------- 555
            ...|       ||..|..:                                              
Yeast   458 VTKCIAKTSTDTDPDEAKLNHRIPHRFLPTSNRGTKWCCHCGYILPWGRHKVRKCSECGIMCHAQ 522

  Fly   556 --------------------------KERAEESSDPIP--------------------------V 568
                                      |...|:....:|                          .
Yeast   523 CAHLVPDFCGMSMEMANKILKTIQDTKRNQEKKKRTVPSAQLGSSIGTANGSDLSPSKLAERANA 587

  Fly   569 PLPPLP------------------------------------------------YEAMSGGAEAC 585
            ||||.|                                                |...:.||:..
Yeast   588 PLPPQPRKHDKTPSPQKVGRDSPTKQHDPIIDKRISLQTHGREKLNKFIDENEAYLNFTEGAQQT 652

  Fly   586 ----------------------------------------------------------------- 585
                                                                             
Yeast   653 AEFSSPEKTLDPTSNRRSLGLTDLSIEHSQTWESKDDLMRDELELWKAQREEMELEIKQDSGEIQ 717

  Fly   586 --------------------------------ETH----------------DHA----------- 591
                                            .||                |||           
Yeast   718 EDLEVDHIDLETKQKLDWENKNDFREADLTIDSTHTNPFRDMNSETFQIEQDHASKEVLQETVSL 782

  Fly   592 -----HIVAPPPPEDPLEPGT------------QRQYSLNDFELIRVIGRGSYAKVLMVELRRTR 639
                 |.......:.|.:..|            :|:.||::|.|::|:|:|::.||::.:.:.|.
Yeast   783 APTSTHASRTTDQQSPQKSQTSTSAKHKKRAAKRRKVSLDNFVLLKVLGKGNFGKVILSKSKNTD 847

  Fly   640 RIYAMKVIKKALVTDDEDIDWVQTEKHVF--ETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDL 702
            |:.|:||:||..:..:.||:..:.||.||  .|.:.||||..|:..|||.:|::|.:||:.||||
Yeast   848 RLCAIKVLKKDNIIQNHDIESARAEKKVFLLATKTKHPFLTNLYCSFQTENRIYFAMEFIGGGDL 912

  Fly   703 MYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIR 767
            |:|:|.| ||....|:|||||:.|||.:.|:.|:|||||||:|:||..|||||:.|||:||:.:.
Yeast   913 MWHVQNQ-RLSVRRAKFYAAEVLLALKYFHDNGVIYRDLKLENILLTPEGHIKIADYGLCKDEMW 976

  Fly   768 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYL 832
            .|:.||||||||.::|||||:.::|..:|||||.|||||:||..:|||         ..:.||.:
Yeast   977 YGNRTSTFCGTPEFMAPEILKEQEYTKAVDWWAFGVLLYQMLLCQSPF---------SGDDEDEV 1032

  Fly   833 FQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQV 897
            |..||......|..::.....:.:|.|.|:|..|||.....| .:::..|||:|::::.:...:|
Yeast  1033 FNAILTDEPLYPIDMAGEIVQIFQGLLTKDPEKRLGAGPRDA-DEVMEEPFFRNINFDDILNLRV 1096

  Fly   898 TPPFKPRLDSDRDLANFPPEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYV 947
            .||:.|.:.|..|.:.|..|||.....|||... |:....|.||.||.::
Yeast  1097 KPPYIPEIKSPEDTSYFEQEFTSAPPTLTPLPS-VLTTSQQEEFRGFSFM 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 23/58 (40%)
S_TKc 616..884 CDD:214567 119/269 (44%)
STKc_aPKC 620..947 CDD:270740 139/328 (42%)
PKC1NP_009445.2 HR1_PKC-like_1_fungi 1..72 CDD:212011
HR1_PKC-like_2_fungi 110..181 CDD:212010
C2_fungal_Pkc1p 211..319 CDD:176071
C1_ScPKC1-like_rpt1 413..464 CDD:410372 23/53 (43%)
C1_ScPKC1-like_rpt2 478..536 CDD:410373 0/57 (0%)
STKc_PKC 828..1145 CDD:270722 139/328 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I225
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46471
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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