DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and AT5G09890

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001031863.1 Gene:AT5G09890 / 830849 AraportID:AT5G09890 Length:516 Species:Arabidopsis thaliana


Alignment Length:383 Identity:115/383 - (30%)
Similarity:184/383 - (48%) Gaps:89/383 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 QRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETAS 672
            :|:..::||||:.|||:|::.:|.:..||.|..:||||.:||..:.....::.|::|:::.....
plant    94 RRKIGIDDFELLTVIGKGAFGEVRLCRLRSTSEVYAMKKLKKTEMLSRGQVEHVRSERNLLAEVD 158

  Fly   673 NHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGII 737
            :. ::|.|...||....|:.::|::.|||:|..:.|:..|.|:.||||.||..||::.:|:...:
plant   159 SR-YIVKLFYSFQDSECLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYV 222

  Fly   738 YRDLKLDNVLLDHEGHIKLTDYGMCK------------------------EGIRPGDTT------ 772
            :||:|.||::||..||:||:|:|:||                        .|....|..      
plant   223 HRDIKPDNLILDKSGHLKLSDFGLCKPLDDKYSSLLLEDDEMLSQDSENQSGKSDADKAPWQMPK 287

  Fly   773 ---------------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASE 822
                           || .||.:|:|||:|..:.||...|||:||.:|||||.|..||    .|:
plant   288 EQLLQWKRNRRALAYST-VGTLDYMAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPF----CSD 347

  Fly   823 NPDQNTEDYLFQVILEKTI------RIPR--SLSVRAASVLKGFLNKNPADRLGCHRES-----A 874
            :|         ::...|.|      :.|.  .:|..|..::         .||.|..:|     .
plant   348 DP---------RITCRKIINWRVCLKFPEEPKISDEARDLI---------CRLLCDVDSRLGTRG 394

  Fly   875 FMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFP--PEFTG---EAVQLTP 927
            ..:|.|||:||...|:.|...:..  ::|.:|.:.|..||.  ||..|   ||.|:.|
plant   395 VEEIKSHPWFKGTPWDKLYDMEAA--YRPIVDGELDTQNFEKFPEVEGSPSEAPQVGP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 110/371 (30%)
AT5G09890NP_001031863.1 MobB_NDR_LATS-like 36..97 CDD:439267 1/2 (50%)
STKc_NDR_like 100..468 CDD:270750 114/377 (30%)
Blue background indicates that the domain is not in the aligned region.

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