DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and WAG2

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_188054.1 Gene:WAG2 / 820658 AraportID:AT3G14370 Length:480 Species:Arabidopsis thaliana


Alignment Length:379 Identity:111/379 - (29%)
Similarity:172/379 - (45%) Gaps:91/379 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 LNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFL 677
            |...:|||.:|.|:..:|.:..||.:...:|:|||.:..:|.::.:..|:||..:. :..:||||
plant    85 LRHLKLIRHLGTGNLGRVFLCNLRDSSARFALKVIDRNCLTTEKKLSQVETEAEIL-SLLDHPFL 148

  Fly   678 VGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQ--RRLPEEHARFYAAEISLALNFLHEKGIIYRD 740
            ..|::..........:|::...|||...:::|  .|||.:..||:|||:.:||.:||..||:|||
plant   149 PTLYARIDESHYTCLLIDYAPNGDLHSLLRKQPGNRLPIQPVRFFAAEVLVALEYLHAMGIVYRD 213

  Fly   741 LKLDNVLLDHEGHIKLTDYGMC----------------------------------------KEG 765
            ||.:||||..:||:.|:|:.:|                                        :|.
plant   214 LKPENVLLREDGHVMLSDFDLCFKSDVVPTFKSRRYRRSSSSPSLRRRRSGCFSVAAEKKYEREE 278

  Fly   766 I------RPGDTTSTFC-GTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASEN 823
            |      .|....|..| ||..|:|||::.|..:|..|||||.|:.|||:|.|.:||    ..|:
plant   279 IVSEFAAEPVTAFSRSCVGTHEYLAPELVSGNGHGSGVDWWAFGIFLYELLYGTTPF----KGES 339

  Fly   824 PDQNTEDYLFQVILEKTIRIPRSLSV-------RAASVLKGFLNKNPADRLGCHRESAFMDIVSH 881
            .:|.         |...:...::.|.       .|..:::..|.|:|..||||.|.:  .||..|
plant   340 KEQT---------LRNIVSTTKTASFHMDGDLDEARDLIEKLLVKDPRKRLGCARGA--QDIKRH 393

  Fly   882 PFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLT--PDDDHVI 933
            |||..:.|.|:..      :||           |.|..|..::.:  |...|||
plant   394 PFFDGIKWPLIRH------YKP-----------PEEVRGLVIKKSTRPHASHVI 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 108/372 (29%)
WAG2NP_188054.1 STKc_phototropin_like 86..420 CDD:270726 106/366 (29%)
Blue background indicates that the domain is not in the aligned region.

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