DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and WAG2

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_188054.1 Gene:WAG2 / 820658 AraportID:AT3G14370 Length:480 Species:Arabidopsis thaliana


Alignment Length:379 Identity:111/379 - (29%)
Similarity:172/379 - (45%) Gaps:91/379 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 LNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFL 677
            |...:|||.:|.|:..:|.:..||.:...:|:|||.:..:|.::.:..|:||..:. :..:||||
plant    85 LRHLKLIRHLGTGNLGRVFLCNLRDSSARFALKVIDRNCLTTEKKLSQVETEAEIL-SLLDHPFL 148

  Fly   678 VGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQ--RRLPEEHARFYAAEISLALNFLHEKGIIYRD 740
            ..|::..........:|::...|||...:::|  .|||.:..||:|||:.:||.:||..||:|||
plant   149 PTLYARIDESHYTCLLIDYAPNGDLHSLLRKQPGNRLPIQPVRFFAAEVLVALEYLHAMGIVYRD 213

  Fly   741 LKLDNVLLDHEGHIKLTDYGMC----------------------------------------KEG 765
            ||.:||||..:||:.|:|:.:|                                        :|.
plant   214 LKPENVLLREDGHVMLSDFDLCFKSDVVPTFKSRRYRRSSSSPSLRRRRSGCFSVAAEKKYEREE 278

  Fly   766 I------RPGDTTSTFC-GTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASEN 823
            |      .|....|..| ||..|:|||::.|..:|..|||||.|:.|||:|.|.:||    ..|:
plant   279 IVSEFAAEPVTAFSRSCVGTHEYLAPELVSGNGHGSGVDWWAFGIFLYELLYGTTPF----KGES 339

  Fly   824 PDQNTEDYLFQVILEKTIRIPRSLSV-------RAASVLKGFLNKNPADRLGCHRESAFMDIVSH 881
            .:|.         |...:...::.|.       .|..:::..|.|:|..||||.|.:  .||..|
plant   340 KEQT---------LRNIVSTTKTASFHMDGDLDEARDLIEKLLVKDPRKRLGCARGA--QDIKRH 393

  Fly   882 PFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLT--PDDDHVI 933
            |||..:.|.|:..      :||           |.|..|..::.:  |...|||
plant   394 PFFDGIKWPLIRH------YKP-----------PEEVRGLVIKKSTRPHASHVI 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556
S_TKc 616..884 CDD:214567 97/323 (30%)
STKc_aPKC 620..947 CDD:270740 108/372 (29%)
WAG2NP_188054.1 STKc_phototropin_like 86..420 CDD:270726 106/366 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

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