DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and AT2G44830

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_850426.1 Gene:AT2G44830 / 819092 AraportID:AT2G44830 Length:765 Species:Arabidopsis thaliana


Alignment Length:388 Identity:116/388 - (29%)
Similarity:187/388 - (48%) Gaps:104/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 LNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFL 677
            ::.|:|::.:|.|....|.:.||..||..:|:||:.||.:.|.:.::..|||:.:.:.. :||||
plant   360 MSHFKLLKRLGCGDIGSVYLAELSGTRCHFAVKVMDKASLEDRKKLNRAQTERDILQLL-DHPFL 423

  Fly   678 VGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEH-----ARFYAAEISLALNFLHEKGII 737
            ..|::.|:|......|:|:..||||  |..|||: |.:|     |||||||:.|||.:||..|::
plant   424 PTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQ-PGKHFSEYAARFYAAEVLLALEYLHMLGVV 485

  Fly   738 YRDLKLDNVLLDHEGHIKLTDYGM-----------------------------CKEG-------- 765
            |||||.:|||:..:|||.|:|:.:                             |.|.        
plant   486 YRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTFDSDPSRRGAFCVQPACMEPTSACIIQP 550

  Fly   766 -------------------------------------IRPGDTTSTFCGTPNYIAPEILRGEDYG 793
                                                 ..|...:.:|.||..|:||||::||.:|
plant   551 SCFLPRSIFPNKNKKNKSRKTQADFFKSHSGSLPELVAEPNTRSMSFVGTHEYLAPEIIKGEGHG 615

  Fly   794 FSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRS--LSVRAASVLK 856
            .:||||..|:.::|:|.|::||..:|        ....||.|:.|: ::.|.|  .|.....:::
plant   616 SAVDWWTFGIFVHELLYGKTPFKGSG--------NRATLFNVVGEQ-LKFPESPATSYAGRDLIQ 671

  Fly   857 GFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPR-LDSDRDLANFPPEF 918
            ..|.|:|.:|||..|.:.  :|..||||:.::|.|:  :..|||..|| ::::.     ||::
plant   672 ALLVKDPKNRLGTKRGAT--EIKQHPFFEGVNWALI--RCSTPPEVPRQMETEP-----PPKY 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 114/381 (30%)
AT2G44830NP_850426.1 STKc_phototropin_like 361..715 CDD:270726 112/370 (30%)
Blue background indicates that the domain is not in the aligned region.

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