DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and AT2G20470

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_179637.2 Gene:AT2G20470 / 816567 AraportID:AT2G20470 Length:569 Species:Arabidopsis thaliana


Alignment Length:371 Identity:110/371 - (29%)
Similarity:181/371 - (48%) Gaps:78/371 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   615 DFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVF-ETASNHPFLV 678
            ||:|:.:||:|::.:|.:...:.|.::||||.:|||.:.....::.|:.|:::. |..||  ::|
plant   123 DFDLLTMIGKGAFGEVRVCREKTTGQVYAMKKLKKAEMLRRGQVEHVRAERNLLAEVDSN--YIV 185

  Fly   679 GLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKL 743
            .|:..||....|:.|:|::.|||:|..:.|:..|.||.|:||.||..||:..:|....|:||:|.
plant   186 KLYCSFQDDDHLYLVMEYLPGGDMMTLLMRKDTLTEEEAKFYVAETVLAIESIHRHNYIHRDIKP 250

  Fly   744 DNVLLDHEGHIKLTDYGMCK----------------EGIRPGDTTST------------------ 774
            ||:|||..||::|:|:|:||                .|....:..||                  
plant   251 DNLLLDRYGHLRLSDFGLCKPLDCSAIGENDFSNNSNGSTEQEAGSTAPKRTQQEQLEHWQRNRR 315

  Fly   775 -----FCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQ 834
                 ..|||:|||||:|..:.||...|||:||.::||||.|..||    .|::|.....    :
plant   316 TLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF----YSDDPMSTCR----K 372

  Fly   835 VILEKT-IRIPRS--LSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQ 896
            ::..|: ::.|..  ||..|..::...| .:...|||   .....::.:|.:|:.:||:.:  ..
plant   373 IVNWKSHLKFPEEAILSREAKDLINSLL-CSVRRRLG---SKGADELKAHTWFETVDWDTI--FD 431

  Fly   897 VTPPFKPRLDSDRDLANFPPEFTGEAVQLTPDDDHVIDNIDQSEFE 942
            :...|.|.::.|.|..||                   :..|:||.|
plant   432 MDAAFVPEVNDDLDTQNF-------------------EKFDESESE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 107/366 (29%)
AT2G20470NP_179637.2 MobB_NDR_LATS-like 58..119 CDD:439267
STKc_NDR_like 123..485 CDD:270750 110/371 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.