DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and PRKCD

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001341605.1 Gene:PRKCD / 5580 HGNCID:9399 Length:695 Species:Homo sapiens


Alignment Length:620 Identity:220/620 - (35%)
Similarity:311/620 - (50%) Gaps:130/620 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 PIPTVPMGVAPSSQQMSQHQLQSE--EEIEPAYATVFPNVPQ-APGLSCDGEDRS--------IY 482
            |:..|.:||:..:::..::..::|  .:::| .|.|..:|.. ...:.|....||        :.
Human    99 PVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYFLEDVDCKQSMRSEDEAKFPTMN 162

  Fly   483 RRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLVQKHC 547
            ||||.:..|::.:..|.|.|..|.:..||:.|:|.:|||.:||:||.||...:||||...:...|
Human   163 RRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRC 227

  Fly   548 T------------------DQPE---------------------PLVKE---------------- 557
            |                  |.|.                     .|||:                
Human   228 TGTAANSRDTIFQKERFNIDMPHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCR 292

  Fly   558 --------------------------RAEESSDPIPVPLPPLPYEAMSGGAEACETHDHAHIVAP 596
                                      |..:|:...||.:.. .:|..:|             ||.
Human   293 EKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQ-GFEKKTG-------------VAG 343

  Fly   597 PPPEDPLEPGT-------QRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTD 654
            ...:|  ..||       ..:.::|:|...:|:|:||:.|||:.||:.....:|:|.:||.:|..
Human   344 EDMQD--NSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLI 406

  Fly   655 DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARF 719
            |:|::....||.|...|:.:|||..|...|||...||||:||:.|||||||:|.:.|.....|.|
Human   407 DDDVECTMVEKRVLTLAAENPFLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATF 471

  Fly   720 YAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAP 784
            |||||...|.|||.||||||||||||||||.:||||:.|:|||||.|......|||||||:||||
Human   472 YAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTFCGTPDYIAP 536

  Fly   785 EILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSV 849
            |||:|..|.||||||:.||||||||.|:|||         ..:.||.||:.|...|...||.::.
Human   537 EILQGLKYTFSVDWWSFGVLLYEMLIGQSPF---------HGDDEDELFESIRVDTPHYPRWITK 592

  Fly   850 RAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANF 914
            .:..:|:....:.|..|||     ...:|..|||||.::|.|||::::.|||:|::.|.||.:||
Human   593 ESKDILEKLFEREPTKRLG-----VTGNIKIHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNF 652

  Fly   915 PPEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYVNP 949
            ..||..|..:|:..|.::||::|||.|.||.:|||
Human   653 DQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNP 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 23/69 (33%)
S_TKc 616..884 CDD:214567 131/267 (49%)
STKc_aPKC 620..947 CDD:270740 159/326 (49%)
PRKCDNP_001341605.1 C1_1 178..227 CDD:278556 21/48 (44%)
C1_1 250..302 CDD:278556 3/51 (6%)
STKc_nPKC_delta 372..687 CDD:173710 160/328 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.