DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and PRKCB

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens


Alignment Length:671 Identity:234/671 - (34%)
Similarity:308/671 - (45%) Gaps:200/671 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 PQAPGLSCDGEDRSI--YRRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCI 529
            |.|.....:||:.::  .|:||.|.:.::.|..|.|.|:.|.:..||::|.|.|||.|:|||:|.
Human     4 PAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQ 68

  Fly   530 QCKLLVHKKCHKLVQKHC--------TDQPEPLVKERAEESSDP--------------------- 565
            .|..:|||:||:.|...|        :|.|....|.:....|.|                     
Human    69 VCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCD 133

  Fly   566 -------------IP-----------------------------------VPLPPL----PY--- 575
                         :|                                   ||:.|.    ||   
Human   134 TCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDAKNLVPMDPNGLSDPYVKL 198

  Fly   576 ----------------------------------------------------------------- 575
                                                                             
Human   199 KLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGI 263

  Fly   576 -----EAMSGGAEACETHDHAHIVAPPPPED----------------------PLEP-------- 605
                 .::.|..:.....:..:...|.|||.                      |.|.        
Human   264 SELQKASVDGWFKLLSQEEGEYFNVPVPPEGSEANEELRQKFERAKISQGTKVPEEKTTNTVSKF 328

  Fly   606 ---GTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHV 667
               |.:.:..|.||..:.|:|:||:.||::.|.:.|..:||:|::||.:|..|:|::....||.|
Human   329 DNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 393

  Fly   668 FETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLH 732
            .......|||..|||||||..||:||:|:|.|||||||:|:..|..|.||.||||||::.|.||.
Human   394 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 458

  Fly   733 EKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVD 797
            .|||||||||||||:||.|||||:.|:|||||.|..|.||.||||||:||||||:..:.||.|||
Human   459 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVD 523

  Fly   798 WWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKN 862
            |||.||||||||||::||      |..|   ||.|||.|:|..:..|:|:|..|.::.||.:.|:
Human   524 WWAFGVLLYEMLAGQAPF------EGED---EDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKH 579

  Fly   863 PADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTP 927
            |..||||..|.. .||..|.||:.:|||.||||::.||:||:. ..|:..||...||.....|||
Human   580 PGKRLGCGPEGE-RDIKEHAFFRYIDWEKLERKEIQPPYKPKA-CGRNAENFDRFFTRHPPVLTP 642

  Fly   928 DDDHVIDNIDQSEFEGFEYVN 948
            .|..||.||||||||||.:||
Human   643 PDQEVIRNIDQSEFEGFSFVN 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 24/61 (39%)
STKc_aPKC 620..947 CDD:270740 177/326 (54%)
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383 24/56 (43%)
C1_cPKC_rpt2 102..155 CDD:410386 4/52 (8%)
C2_PKC_alpha_gamma 159..289 CDD:175992 6/129 (5%)
STKc_cPKC_beta 341..663 CDD:270767 179/332 (54%)

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