DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and aurkb

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_012809281.1 Gene:aurkb / 549613 XenbaseID:XB-GENE-1019626 Length:370 Species:Xenopus tropicalis


Alignment Length:298 Identity:78/298 - (26%)
Similarity:156/298 - (52%) Gaps:34/298 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 QRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDW-----VQTEKHV 667
            :|:::::||::.|.:|:|.:..|.:...::.:.|.|:||:.|:.: :.|.::.     ::.:.|:
 Frog    95 KRKFTIDDFDIGRPLGKGKFGNVYLARDKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHL 158

  Fly   668 FETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLH 732
                 .||.::.:::.|....|::.::||...|:|...:|:..|..|:.:..:..|::.||.:.|
 Frog   159 -----RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALQYCH 218

  Fly   733 EKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVD 797
            |:.:|:||:|.:|:|:.::|.:|:.|:|.....  |.....|.|||.:|:.||::.|:.:...||
 Frog   219 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA--PSLRRRTMCGTLDYLPPEMIEGKTHDEKVD 281

  Fly   798 WWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKN 862
            .|..|||.:|.|.|..|||      :| .:||.:  :.|:...::.|..||..:..::...|..:
 Frog   282 LWCAGVLCFEFLVGMPPFD------SP-SHTETH--RRIVNVDLKFPPFLSDGSKDLISKLLRYH 337

  Fly   863 PADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPP 900
            |..||      ....::.||      |.....::|.||
 Frog   338 PPQRL------PLKGVMEHP------WVKANSRRVLPP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 75/286 (26%)
aurkbXP_012809281.1 STKc_Aurora-B_like 96..365 CDD:271019 78/297 (26%)
Blue background indicates that the domain is not in the aligned region.

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