DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and dop

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001261884.1 Gene:dop / 39686 FlyBaseID:FBgn0267390 Length:2139 Species:Drosophila melanogaster


Alignment Length:1133 Identity:260/1133 - (22%)
Similarity:385/1133 - (33%) Gaps:360/1133 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SPTCRSRCSSPC------PGSPC----------GS-------ITPPPPPMLTSSQQHLHSNKNCP 118
            |.:|.|...| |      |.||.          ||       :|......|:.|...|||.    
  Fly   139 SSSCNSSVKS-CSGLELLPTSPAKLSIGNDSTNGSSMMRNLNLTKSSSGGLSGSSSSLHSR---- 198

  Fly   119 AAQQLMTHLDYAARRQSLDQLDSPQSKYFDIQANQLSDIMCRGAVVSSIQSANNTLTRGVSMH-- 181
            ....|:..:.|.....||..:....|....::.:.|.    :.|...:.....:.||..:.:.  
  Fly   199 GYTALLRKISYQQHTNSLRAVSGETSNLLRMRHSSLG----KSAPCLTGNYFRHELTAPLPVQPP 259

  Fly   182 ------------SRSGSAHG----SHHGSHHSHSHHGSAHGSLGCLQGGVGVGVGTGS------- 223
                        |||||..|    .||  ||.|.|.....||.|   ||.|.|.|:.|       
  Fly   260 GFGASPLGGHNISRSGSCAGIGLAKHH--HHHHLHGVVMRGSAG---GGAGSGGGSSSGVAHHRL 319

  Fly   224 ---TGSIGMMSAGHIDT------GDYDVPH---PHPYTHHYMQTTAS------------------ 258
               |.|..:.:||...|      ...|.|.   |.|:....::..||                  
  Fly   320 SLVTNSAAVAAAGGSRTHSPYSASPVDSPRLNSPMPFAFAPIKRIASCRGVVADGRRWSVASLPS 384

  Fly   259 ----VTPPHTSLSR----------------PG---------SAGAVCQGHDSGSDSSQGCGGSIM 294
                .||..::||.                ||         :|||.|..|     ..|.|     
  Fly   385 SGYGTTPGSSNLSSQCSSQEGLNQLAHNIPPGVQEADAAAVAAGACCAEH-----LKQHC----- 439

  Fly   295 GGMLVMGHPGHMGSL---------------GHHSAGSGSLGRCSSRCHNTNTTT-TDDSGGGSSG 343
                    |.|...|               ............|.:.|...:.|. ...:|||::.
  Fly   440 --------PKHCALLLAVSQKQLTPQPPKPTQLQPQKSMTAACVNCCAELSVTCGGQQAGGGAAN 496

  Fly   344 GGGVPGTMSSASMAVGMPGMLMDYHHSHHSGSAGSGLNGCGGGSIAGGSIGGRSSVLGTIHNGHG 408
            ||....:..|::|.||  |.:..|....     ...|:......|....|    :|:.|::....
  Fly   497 GGSSANSSGSSAMQVG--GRMSPYFRPR-----SRSLSSPSRSPIVDNEI----AVMNTLYKERF 550

  Fly   409 H-----------------------------------HHQ--QYHHECIHYERLPIPVPIPTVPMG 436
            .                                   |||  :...:|:|.....:..        
  Fly   551 PKATQQMEERLKLFINENKSAACNSFRDSQPIVRFVHHQVLEMARDCLHKSEAKLIT-------- 607

  Fly   437 VAPSSQQMSQHQLQSEEEIEPAYATVFPNVPQAPGLSCDGEDRS---IYRRGARR---------- 488
                    ||:..:..|.:|..........|:| ....:|..:.   |..|.||.          
  Fly   608 --------SQYFYELSENLERLLVETKEKSPEA-AAELNGVIKKLLLIISRPARLLECLEFDPQE 663

  Fly   489 -WRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLVQKHCTDQ-- 550
             :..|....||. :|....:.....|...:: ||.|.....:|.:|       :..|:.|::|  
  Fly   664 FYELLEAAEGHA-KAMPVIKADIPQYIIHKL-GLNRDPIAELQQEL-------RETQQMCSEQVT 719

  Fly   551 --PEPL---------------VKERAEESSDPI----------PVPLPPLPY------------- 575
              .:||               .|:.:..:.|.|          |...|..|.             
  Fly   720 VDADPLHPGGSLLLNSPLTSAAKQLSSLALDAIAMDSGSGTATPQQPPQTPVATCDTAPSFALAI 784

  Fly   576 -------------------------EAMSGGAEACETHDHAHIVAPPPPEDPLEPGTQRQYSLND 615
                                     |.::||:.|..|...|.   .|.|::            ||
  Fly   785 SQMNEEKGGSSSAVGGGSSSKVAGAEGITGGSAATATGSGAQ---QPSPQE------------ND 834

  Fly   616 FELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGL 680
            |:::::|..|:|..|.:|:.:.||:.:|||.|.|..:.....::.|..|:.:...|.| ||:|.:
  Fly   835 FDIVKLISNGAYGAVYLVKHKTTRQRFAMKKINKNNLILRNQVEQVFAERDILSFADN-PFVVSM 898

  Fly   681 HSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDN 745
            :..|:|...|..|:|:|.|||....::....||.:.||||.||..||:.:||..||::||||.||
  Fly   899 YCSFETKKHLCLVMEYVEGGDCGTLLKNIGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDN 963

  Fly   746 VLLDHEGHIKLTDYGMCKEGIRPGDT----------TSTFC-----GTPNYIAPEILRGEDYGFS 795
            :|:...|||||||:|:.|.|:....|          |..|.     |||.|||||::..:.||..
  Fly   964 LLITALGHIKLTDFGLSKMGLMSLATNLYEGYIDSETRQFSDKQVYGTPEYIAPEVILRQGYGKP 1028

  Fly   796 VDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRS----LSVRAASVLK 856
            ||||::|::|||.|.|..||.        .:.||: ||...:...|..|.|    :...|..::.
  Fly  1029 VDWWSMGIILYEFLIGCVPFF--------GETTEE-LFAHTVNDDIEWPDSEDWPVQAEAKDIIS 1084

  Fly   857 GFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGE 921
            ..|.:||.||||  .:|..:::..|.:|..|||..|.|::.  .|.|:|..|.|.:.|.......
  Fly  1085 QLLQQNPRDRLG--TQSGALEMKEHEYFLGMDWNSLLRQKA--EFVPQLSHDDDTSYFDTRMDRY 1145

  Fly   922 AVQLTPDDDHVIDNIDQSEFEGFEYVNP 949
            ...|..:|..  |..|...|..|....|
  Fly  1146 NHDLGGEDTD--DTDDTPVFGSFNSYTP 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 10/51 (20%)
S_TKc 616..884 CDD:214567 102/286 (36%)
STKc_aPKC 620..947 CDD:270740 119/345 (34%)
dopNP_001261884.1 DUF1908 344..702 CDD:286070 65/405 (16%)
STKc_MAST 834..1115 CDD:270760 105/292 (36%)
S_TKc 835..1110 CDD:214567 102/286 (36%)
PDZ_signaling 1506..1587 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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