DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and JIL-1

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_648432.1 Gene:JIL-1 / 39241 FlyBaseID:FBgn0020412 Length:1207 Species:Drosophila melanogaster


Alignment Length:415 Identity:153/415 - (36%)
Similarity:223/415 - (53%) Gaps:53/415 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 RAEESSDPIPVPLPPLPYEAMSGGAEACETHDHAHIVAPPPPEDPLEPGTQRQY----------S 612
            :|..|:.|        .|...:..:...:..:.||       :..||..|..:|          |
  Fly   208 KASSSTTP--------SYAMPTSNSTPLDLDNEAH-------QRDLEAVTDLKYYVKLYSDEAVS 257

  Fly   613 LNDFELIRVIGRGSYAKVLMVELRRTR----RIYAMKVIKK-ALVTDDEDIDWVQTEKHVFETAS 672
            ||||::|||:|.|:|.:|.:|. :.||    ::|||||:.| .:|...:..:..:||:.|.|...
  Fly   258 LNDFKIIRVLGTGAYGRVFLVR-KLTRHDAGKLYAMKVLNKITVVQKRKTAEHTKTERVVLEAIQ 321

  Fly   673 NHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGII 737
            .:||||.||..||:.|:|:.|::|..||:|..|:.......|...|.|.||:.|||..||:.|||
  Fly   322 RNPFLVSLHYAFQSSSKLYLVLDFANGGELFTHLYHSENFEESRVRVYIAEVVLALEQLHQLGII 386

  Fly   738 YRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDT---TSTFCGTPNYIAPEILR----GEDYGFS 795
            |||:||:|:|||.||||.|:|:|:.|  |...:.   ..:||||..|:||||:|    |.|  .:
  Fly   387 YRDIKLENILLDGEGHIVLSDFGLSK--ILTAENEYRAHSFCGTLEYMAPEIIRTGPPGHD--SA 447

  Fly   796 VDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLN 860
            ||||::|||.:|:|.|.|||   ..|:...|.:|  :.:.|.::...||.|.|..|...:...|.
  Fly   448 VDWWSVGVLTFELLTGASPF---ATSDGQVQQSE--ISRRIQKEQPMIPSSFSANARDFVLKMLE 507

  Fly   861 KNPADRL-GCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQ 924
            |||..|| |.||:::  :|..||||..::|:.|..|:...|:||.|.::.|:.||..||| :.|.
  Fly   508 KNPKRRLGGNHRDAS--EIKEHPFFNGINWQELRTKRRKAPYKPTLTAEDDVQNFSNEFT-DQVP 569

  Fly   925 LTPDDDHVIDNIDQSEFEGFEYVNP 949
            ..|:.|.....|  ..|.|:.||.|
  Fly   570 EDPECDAPPSRI--RLFRGYTYVAP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 134/339 (40%)
JIL-1NP_648432.1 STKc_MSK_N 266..533 CDD:270735 114/278 (41%)
S_TK_X 532..591 CDD:214529 20/61 (33%)
S_TKc 632..886 CDD:214567
Blue background indicates that the domain is not in the aligned region.

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