DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and Stk32c

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001102392.1 Gene:Stk32c / 365381 RGDID:1305864 Length:488 Species:Rattus norvegicus


Alignment Length:371 Identity:117/371 - (31%)
Similarity:189/371 - (50%) Gaps:38/371 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   551 PEPLVKE-RAEESSDPIPVPLPPLPY----EAMSGGAEACETHDHAHIVAPPPPEDPLEPGTQRQ 610
            |.|...: ||.::.|....|.|...:    :.||..:.:..:       |..|..|..|     .
  Rat    36 PPPAASQPRARDAGDARAQPRPLFQWSKWKKRMSMSSISASS-------ARRPVFDDKE-----D 88

  Fly   611 YSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHP 675
            .:.:.|:::|.||:||:.||.:|:.|.|.::||||.:.|....:.:::..|..|..:.:.. .|.
  Rat    89 VNFDHFQILRAIGKGSFGKVCIVQKRDTEKMYAMKYMNKQQCIERDEVRNVFRELEILQEI-EHV 152

  Fly   676 FLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRD 740
            |||.|...||....:|.|::.:.||||.||:|:..:..|:..|.|..|::|||::|..:.||:||
  Rat   153 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVQFSEDTVRLYICEMALALDYLRSQHIIHRD 217

  Fly   741 LKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILR-----GEDYGFSVDWWA 800
            :|.||:|||.:||..|||:.:... |:.|:..:...||..|:||||..     |..|.|.||||:
  Rat   218 VKPDNILLDEQGHAHLTDFNIATI-IKDGERATALAGTKPYMAPEIFHSFVNGGTGYSFEVDWWS 281

  Fly   801 LGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPAD 865
            :||:.||:|.|..|:|:..:      |..:.|.|:....:::...:.|....::|:..|..||. 
  Rat   282 VGVMAYELLRGWRPYDIHSS------NAVESLVQLFSTVSVQYVPTWSKGMVALLRKLLTVNPE- 339

  Fly   866 RLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKP---RLDSD 908
                ||.|:..|:.:.|...::.|:.|..|:|.|.|.|   ||..|
  Rat   340 ----HRFSSLQDMQTAPSLAHVLWDELSEKKVEPGFVPNKGRLHCD 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 103/297 (35%)
Stk32cNP_001102392.1 STKc_Yank1 93..352 CDD:270730 93/271 (34%)
Blue background indicates that the domain is not in the aligned region.

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