DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and Pkn

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster


Alignment Length:930 Identity:248/930 - (26%)
Similarity:361/930 - (38%) Gaps:278/930 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SHSHHGSAHGSLGCLQGGVGVGVGTGSTGSIGMMSAGHIDTGDYDVPHPHPYTHHYMQTTASVTP 261
            :|.|.|||             |.|:..|||..|:..|..|:                ::..|.||
  Fly   665 NHVHMGSA-------------GSGSSLTGSSPMVVGGSRDS----------------ESPISRTP 700

  Fly   262 PHTSL--SRPGSAGAVCQGHDSGSDSSQGCGGSIMGGMLVMGHPGHMGSLGHH--SAGSGSLGRC 322
            ...:|  ..|.:.|...|..:...|:               |...|:.:.|.:  .|.||..|..
  Fly   701 SSDALVEPEPYTPGEQAQNLEFDPDA---------------GINEHVETPGEYPDPAASGLSGMR 750

  Fly   323 SSRCHNTN-TTTTDDSGGGSSGGGGVPGTMSSASMAVGMPGMLMDYHHSHHSGSAGSGLNGCGGG 386
            ....|... :....:|...::|..|.|.|:|     :.|||           .|.|..:.   ||
  Fly   751 PLSMHMQGISVLPPESPPVATGAAGRPNTLS-----LQMPG-----------ASKGQVIQ---GG 796

  Fly   387 SIAG----------------------------------GSIGGRSSVL-------------GTIH 404
            ..|.                                  ..:..|.:.|             |.:.
  Fly   797 RTAAPTTAPPPPPVLKATSTTPILDQELQDALHEFDFLSDLDSRPTTLRRLLKEQKMALDAGALE 861

  Fly   405 N------------------GHGHHHQQYHHE--------CIHYERLPIPVPIPTV---------- 433
            |                  ......||:...        |:. :|.|.....||:          
  Fly   862 NLLLQQQQTEQQALQQRQRQEQLRLQQFQEAQRQAILDLCVK-QREPAEQTSPTLANQTPTFPPL 925

  Fly   434 -------PMGVAPSSQQMSQH---QLQSEEEIEPAYATVFPNVPQA-------------PGLSCD 475
                   .:...|...|...|   |||.:.. .||.....|..|.|             |.:...
  Fly   926 ASNQIMPSLNARPCQSQSPNHNEFQLQPQPP-HPAQKPTNPEPPSAVEQQLHRPVLILPPVVLLG 989

  Fly   476 G--EDRSI-------YRRGARRWRKLYRVNGHIFQAKRFNRRAFCA---YCQDRIWGLGRQGFKC 528
            |  ||||:       |......:  |||.:......:..:..:..|   :|.:.|..||      
  Fly   990 GREEDRSVPPSPLVEYPEDDDEY--LYRGSNENLGTRLHSSHSSSAGDRFCVEVIPQLG------ 1046

  Fly   529 IQCKLLVHKKCHKLVQKHCTDQPEPLVKERA----------------------EESSDPIPVPLP 571
               ||.|...     |:....|..|:::|.|                      :|...|...|:.
  Fly  1047 ---KLYVGSS-----QQQYAQQSSPIIQEPATPTIYGNSAAAGAPQFPQPAQRQEKQPPQQQPIY 1103

  Fly   572 PLPYEAMSGGAEACETHDHAHIVAPPPPEDPLEPGTQRQ-------------------------- 610
            ...||.....|.|.     |.:.:|...........|:|                          
  Fly  1104 ANQYELNVAKAAAA-----ASVYSPSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQP 1163

  Fly   611 -----YSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFET 670
                 .|:::|.|:.|:|||.:.||::.:||...:.||:|.:||..:...::::.:.:||.:||.
  Fly  1164 PNAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEV 1228

  Fly   671 AS--NHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHE 733
            |:  .|||||.|:|||||...:.||:|:..|||||.|:.....| |..|.||||.:.|.|.:|||
  Fly  1229 ANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIHTDVFL-EPRAVFYAACVVLGLQYLHE 1292

  Fly   734 KGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 798
            ..||||||||||:|||.||::|:.|:|:||||:..||.|.||||||.::|||:|....|..:|||
  Fly  1293 NKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDW 1357

  Fly   799 WALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNP 863
            |.||||::|||.|.|||        |..:.|: :|..|:...:|.||.||:.|.:|::..|.|||
  Fly  1358 WGLGVLIFEMLVGESPF--------PGDDEEE-VFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNP 1413

  Fly   864 ADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPD 928
            ..|||.....| .|:....||:::.|:.|..::|.|||.|.::...|::||..|||.|..||||.
  Fly  1414 ERRLGSSERDA-EDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTPP 1477

  Fly   929 DD--HVIDNIDQSEFEGFEY 946
            .:  |:.:. :|..|:.|.|
  Fly  1478 KEPRHLTEE-EQLLFQDFSY 1496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 9/56 (16%)
STKc_aPKC 620..947 CDD:270740 146/331 (44%)
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 148/335 (44%)
Blue background indicates that the domain is not in the aligned region.

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