DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and sgk1

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_005162356.1 Gene:sgk1 / 324140 ZFINID:ZDB-GENE-030131-2860 Length:598 Species:Danio rerio


Alignment Length:584 Identity:189/584 - (32%)
Similarity:279/584 - (47%) Gaps:137/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 RRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQD--RIW-------------------------G 520
            :|..|||.:..:||....|||.|  .:.|..||:  .:|                         .
Zfish    24 KRKVRRWMRNPKVNVEKVQAKGF--LSPCPKCQEGQDLWYTHFPAPYGCCHYSPGGYYLPHPPSP 86

  Fly   521 LGRQGFKCIQCKLLVHKKCH----KLVQKHCTDQPEPLVKERAEESSDPIPVPLPPL-------- 573
            |.:....|..|:...:|.|.    |::.:|..|..   |||...|.....|..:.||        
Zfish    87 LCQPCAPCTPCQPDKNKTCKARKWKMLSRHLNDSK---VKEVEPEGHVICPWTMSPLLGSPVLLE 148

  Fly   574 ------PY--------------------------------------------------EAMSGGA 582
                  ||                                                  :.:|..:
Zfish   149 CCICNGPYITYGHEEAWQPRQRTQAMDLYYHGDPESDYCCSSDTTFMKQRKMGLNDFIQKLSANS 213

  Fly   583 EACETHDHAHIVAPPPPED---------PLEPGTQRQYSL----------NDFELIRVIGRGSYA 628
            .||:..:...|:...||:|         | .|...:|.:|          :||:.::|||:||:.
Zfish   214 YACKHPEVQSILNLTPPQDVELMNSNPSP-PPSPSQQINLGPSSNPTAKPSDFDFLKVIGKGSFG 277

  Fly   629 KVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFV 693
            |||:...|...:.||:||::|..:...::...:.:|::|......||||||||..|||..:|:||
Zfish   278 KVLLARHRSDEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTTDKLYFV 342

  Fly   694 IEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTD 758
            ::::.||:|.||:||:|...|..||||||||:.||.:||...|:|||||.:|:|||.:|||.|||
Zfish   343 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTD 407

  Fly   759 YGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASEN 823
            :|:|||.|.|..|||||||||.|:|||:|..:.|..:||||.||.:|||||.|..||        
Zfish   408 FGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF-------- 464

  Fly   824 PDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMD 888
            ..:||.: ::..||.|.:::..::|..|..:|:|.|.|:...|||...:  |.:|.:|.||..::
Zfish   465 YSRNTAE-MYDNILNKPLQLKPNISNAARHLLEGLLQKDRTKRLGFTDD--FTEIKNHMFFSPIN 526

  Fly   889 WELLERKQVTPPFKPRLDSDRDLANFPPEFTGE----AVQLTPDDDHVIDNIDQS--EFEGFEY 946
            |:.|..|::||||.|.:....||.:|.||||.|    ::..:||...|..:|.::  .|.||.|
Zfish   527 WDDLNAKKLTPPFNPNVTGPNDLRHFDPEFTDEPVPNSIGCSPDSALVTSSITEATEAFLGFSY 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 15/82 (18%)
S_TKc 616..884 CDD:214567 120/267 (45%)
STKc_aPKC 620..947 CDD:270740 145/333 (44%)
sgk1XP_005162356.1 STKc_SGK1 257..595 CDD:270753 147/345 (43%)
S_TKc 265..522 CDD:214567 120/267 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.