DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and Sgk1

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_006227785.1 Gene:Sgk1 / 29517 RGDID:3668 Length:525 Species:Rattus norvegicus


Alignment Length:553 Identity:183/553 - (33%)
Similarity:271/553 - (49%) Gaps:111/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 TVPMGVAPSSQQMSQHQLQSEEEIEPAYATVFPNVPQAPGLSCDGEDRSIYRRGARRWRKLYRVN 496
            |.|.||         |....|.:.|||...           ||.|:                   
  Rat    46 TGPAGV---------HLPPGEPDFEPALCQ-----------SCLGD------------------- 71

  Fly   497 GHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLVQKHCTDQPEP-------- 553
             |.||      |...:..:.|.|.:...|        .|.:.|:   ..:...:|:|        
  Rat    72 -HTFQ------RGMLSPEESRSWEIQPGG--------EVKEPCN---HANILTKPDPRTFWTSDD 118

  Fly   554 --LVKERAEESSDPIPVPLPPLPYEAMSGGAEAC---ETHDHAHI----------VAPPPPEDP- 602
              .:|:|....:|.|         :.::..:.||   |...:..|          ..|.||..| 
  Rat   119 PAFMKQRRMGLNDFI---------QKLANNSYACKHPEVQSYLKISQPQEPELMNANPSPPPSPS 174

  Fly   603 ----LEPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQT 663
                |.|.:......:||..::|||:||:.|||:...:.....||:||::|..:...::...:.:
  Rat   175 QQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEAFYAVKVLQKKAILKKKEEKHIMS 239

  Fly   664 EKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLAL 728
            |::|......||||||||..|||..:|:||::::.||:|.||:||:|...|..||||||||:.||
  Rat   240 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL 304

  Fly   729 NFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYG 793
            .:||...|:|||||.:|:|||.:|||.|||:|:|||.|....|||||||||.|:|||:|..:.|.
  Rat   305 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYD 369

  Fly   794 FSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGF 858
            .:||||.||.:|||||.|..||        ..:||.: ::..||.|.:::..:::..|..:|:|.
  Rat   370 RTVDWWCLGAVLYEMLYGLPPF--------YSRNTAE-MYDNILNKPLQLKPNITNSARHLLEGL 425

  Fly   859 LNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGE-- 921
            |.|:...|||.  :..||:|.||.||..::|:.|..|::||||.|.:....||.:|.||||.|  
  Rat   426 LQKDRTKRLGA--KDDFMEIKSHIFFSLINWDDLINKKITPPFNPNVSGPSDLRHFDPEFTEEPV 488

  Fly   922 --AVQLTPDDDHVIDNIDQS--EFEGFEYVNPL 950
              ::..:||...|..::.::  .|.||.|..|:
  Rat   489 PSSIGRSPDSILVTASVKEAAEAFLGFSYAPPM 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 9/51 (18%)
S_TKc 616..884 CDD:214567 119/267 (45%)
STKc_aPKC 620..947 CDD:270740 142/332 (43%)
Sgk1XP_006227785.1 S_TKc 192..449 CDD:214567 119/267 (45%)
STKc_SGK 196..518 CDD:270727 142/332 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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