DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and ppk33

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_588234.1 Gene:ppk33 / 2539202 PomBaseID:SPCC162.10 Length:338 Species:Schizosaccharomyces pombe


Alignment Length:318 Identity:101/318 - (31%)
Similarity:168/318 - (52%) Gaps:30/318 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 EPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVF 668
            :|......|::.|::..|||:||::.|.:|:.|:|::.:|:|.|.|. ..|:..|..::.|..:.
pombe    18 DPNATNFESVSQFKIRNVIGKGSWSTVFVVKHRQTKQRFALKCINKK-KHDEHKIKKLRNEVLLL 81

  Fly   669 ETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHE 733
            ::. |||.|...:|.|:..::::.|.:.:.||||.||:. ||:..|...|.:..|:..||.::|.
pombe    82 QSL-NHPLLCKFYSEFEDETKIYLVTDLMLGGDLRYHIS-QRKFNESVIRIWMVELVSALIYIHS 144

  Fly   734 KGIIYRDLKLDNVLLDHEGHIKLTDYGMCKE---GIRPGDTTSTF--CGTPNYIAPE-ILRGEDY 792
            ||:::||:|.||:|||.:||.||.|:.:..:   ...|..:..|.  .|||.|:||| ::....|
pombe   145 KGVLHRDVKPDNILLDEKGHCKLADFNVAAKVHTSSSPSKSNMTVGRVGTPVYMAPETLIHAVSY 209

  Fly   793 GFSVDWWALGVLLYEMLAGRSPF------DLAGASENPDQNTEDYLFQVILEKTIRIPR-----S 846
            ..| |||:||:..||.|....||      :...|||....::.|.     |...:.|.|     :
pombe   210 KES-DWWSLGITFYECLFQVRPFPNHLLINWIRASEEEKASSADR-----LSSALHISRDKKLTT 268

  Fly   847 LSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPR 904
            :|..|.|.:..||..:...||| |...   .:.:||||.::..|.:.:..:||.|:|:
pombe   269 ISKDARSAVMAFLEMDIKKRLG-HSSK---KLQTHPFFCSISLETVSKGNLTPIFRPK 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 98/302 (32%)
ppk33NP_588234.1 Protein Kinases, catalytic domain 29..302 CDD:473864 92/285 (32%)
Blue background indicates that the domain is not in the aligned region.

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