DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and Pkn2

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001099225.2 Gene:Pkn2 / 207122 RGDID:620146 Length:983 Species:Rattus norvegicus


Alignment Length:447 Identity:171/447 - (38%)
Similarity:237/447 - (53%) Gaps:63/447 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   553 PLVKERAEESSDP------------IPVPLPPLPYEAMSGG--------------AEACET---- 587
            |:|..|..|.:.|            :....||.|..|.|.|              .:..||    
  Rat   544 PVVDARTPELAPPASDSTVTKLDFDLEPEAPPAPPRASSLGEIDDSSELRVLDIPGQGSETVFDI 608

  Fly   588 -HDHAHIVAPPPPEDPLE-PGTQR-----------------QYSLNDFELIRVIGRGSYAKVLMV 633
             :|..::......|..|. |.:.|                 |::|.||....|:|||.:.|||:.
  Rat   609 ENDRNNMRPKSKSEYELNIPDSSRSCWSVGELEDKRSQQRFQFNLQDFRCCAVLGRGHFGKVLLA 673

  Fly   634 ELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASN--HPFLVGLHSCFQTPSRLFFVIEF 696
            |.:.|..::|:|.:||..:...:::|.:..||.:|||.::  |||||.|.:||||...:.||:|:
  Rat   674 EYKHTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSVRHPFLVNLFACFQTKEHVCFVMEY 738

  Fly   697 VRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGM 761
            ..|||||.|:... ...|..|.||||.:.|.|.:|||..|:||||||||:|||.||.:|:.|:|:
  Rat   739 AAGGDLMMHIHTD-VFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGFVKIADFGL 802

  Fly   762 CKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQ 826
            ||||:..||.||||||||.::|||:|....|..:||||.||||:||||.|.|||        |..
  Rat   803 CKEGMGYGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF--------PGD 859

  Fly   827 NTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWEL 891
            :.|: :|..|:...:|.||.||..|.|:::..|.:||..|||...:.| .|:..||||:..||..
  Rat   860 DEEE-VFDSIVNDEVRYPRFLSTEAISIMRRLLRRNPERRLGAGEKDA-EDVKKHPFFRLTDWSA 922

  Fly   892 LERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPD-DDHVIDNIDQSEFEGFEYV 947
            |..|:|.|||.|.:....|::||..|||.||..|||. :..::...:|..|..|:||
  Rat   923 LLDKKVKPPFVPTIRGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYV 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 147/329 (45%)
Pkn2NP_001099225.2 HR1_PKN_1 42..107 CDD:212012
HR1_PKN2_2 128..201 CDD:212021
HR1_PKN2_3 209..282 CDD:212025
C2_PKN-like 389..472 CDD:176069
STKc_PKN 656..981 CDD:270741 150/335 (45%)
Blue background indicates that the domain is not in the aligned region.

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