DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and Prkcb

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_032881.1 Gene:Prkcb / 18751 MGIID:97596 Length:673 Species:Mus musculus


Alignment Length:674 Identity:235/674 - (34%)
Similarity:308/674 - (45%) Gaps:206/674 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 PQAPGLSCDGEDRSI--YRRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCI 529
            |.|.....:||:.::  .|:||.|.:.::.|..|.|.|:.|.:..||::|.|.|||.|:|||:|.
Mouse     4 PAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQ 68

  Fly   530 QCKLLVHKKCHKLVQ--------------------------------KHC--------------- 547
            .|..:|||:||:.|.                                .||               
Mouse    69 VCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCD 133

  Fly   548 -------------------TDQPE------------------------------------PLVKE 557
                               ||..|                                    |.||.
Mouse   134 TCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKL 198

  Fly   558 R---------------------------------------------------------------- 558
            :                                                                
Mouse   199 KLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGI 263

  Fly   559 ---------------AEESSDPIPVPLPPLPYEAMSGGAEACETHDHAHI-VAPPPPEDPL---- 603
                           ::|..:...||:||   |...|..|..:..:.|.| .....||:..    
Mouse   264 SELQKAGVDGWFKLLSQEEGEYFNVPVPP---EGSEGNEELRQKFERAKIGQGTKAPEEKTANTI 325

  Fly   604 ----EPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTE 664
                ..|.:.:..|.||..:.|:|:||:.||::.|.:.|..:||:|::||.:|..|:|::....|
Mouse   326 SKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 390

  Fly   665 KHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALN 729
            |.|.......|||..|||||||..||:||:|:|.|||||||:|:..|..|.||.||||||::.|.
Mouse   391 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 455

  Fly   730 FLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGF 794
            ||..|||||||||||||:||.|||||:.|:|||||.|..|.||.||||||:||||||:..:.||.
Mouse   456 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGK 520

  Fly   795 SVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFL 859
            ||||||.||||||||||::||      |..|   ||.|||.|:|..:..|:|:|..|.::.||.:
Mouse   521 SVDWWAFGVLLYEMLAGQAPF------EGED---EDELFQSIMEHNVAYPKSMSKEAVAICKGLM 576

  Fly   860 NKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQ 924
            .|:|..||||..|.. .||..|.||:.:|||.||||::.||:||:. ..|:..||...||.....
Mouse   577 TKHPGKRLGCGPEGE-RDIKEHAFFRYIDWEKLERKEIQPPYKPKA-CGRNAENFDRFFTRHPPV 639

  Fly   925 LTPDDDHVIDNIDQSEFEGFEYVN 948
            |||.|..||.||||||||||.:||
Mouse   640 LTPPDQEVIRNIDQSEFEGFSFVN 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 26/117 (22%)
S_TKc 616..884 CDD:214567 144/267 (54%)
STKc_aPKC 620..947 CDD:270740 177/326 (54%)
PrkcbNP_032881.1 C1_cPKC_rpt1 35..92 CDD:410383 23/56 (41%)
C1_cPKC_rpt2 102..155 CDD:410386 3/52 (6%)
C2_PKC_alpha_gamma 159..289 CDD:175992 4/129 (3%)
STKc_cPKC_beta 341..663 CDD:270767 179/332 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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