DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and sax-1

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_508627.5 Gene:sax-1 / 180655 WormBaseID:WBGene00004727 Length:476 Species:Caenorhabditis elegans


Alignment Length:357 Identity:120/357 - (33%)
Similarity:188/357 - (52%) Gaps:61/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 SLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPF 676
            ::||||.::|||||::.:|.:|:...|..|||||:::|:.:.:.|....|:.|:.:...| :..:
 Worm    83 TVNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERDILSEA-DCDW 146

  Fly   677 LVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDL 741
            :|.::..||..|.|:.|:||:.|||:|..:.::..|.||..:||.||.:||:.|:|..|.|:||:
 Worm   147 VVKMYYSFQDYSNLYLVMEFLPGGDMMTLLIKKDTLTEEATQFYIAEAALAIQFIHSLGFIHRDI 211

  Fly   742 KLDNVLLDHEGHIKLTDYGMCKEGIR---------------PGDTTS------------------ 773
            |.||:|||..||:||:|:|:| .|::               |.|..|                  
 Worm   212 KPDNLLLDARGHVKLSDFGLC-TGLKKFHRTDHYRNWPSTLPPDFISKPFESKRKAETWKRNRRA 275

  Fly   774 ---TFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQV 835
               :..|||:|||||:.:...|..|.|||:|||::||||.|..||    .||.|.   |.|...:
 Worm   276 YAYSTVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPF----CSELPQ---ETYRKVI 333

  Fly   836 ILEKTIRIPRS--LSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVT 898
            ..::|:..|..  :|:.|.:.:|.|..: ...|||.|  ....:|...||.|.:||..:..:  .
 Worm   334 NWQQTLVFPSDVPISIEAKATIKRFCCE-AERRLGNH--GGLDEIKQCPFVKRIDWNHIRER--P 393

  Fly   899 PPFKPRLDSDRDLANFPPEFTGEAVQLTPDDD 930
            ||.:..:.|..|.:|| .:|        ||:|
 Worm   394 PPIRVTVKSIDDTSNF-DDF--------PDED 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 116/349 (33%)
sax-1NP_508627.5 MobB_NDR-like 18..82 CDD:439270
STKc_NDR_like 85..443 CDD:270750 120/355 (34%)
Blue background indicates that the domain is not in the aligned region.

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