DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and rsks-1

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_499447.2 Gene:rsks-1 / 176554 WormBaseID:WBGene00012929 Length:550 Species:Caenorhabditis elegans


Alignment Length:396 Identity:148/396 - (37%)
Similarity:219/396 - (55%) Gaps:47/396 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 DHAH-------IVAPPPP----EDPLEPGTQRQYSL----------NDFELIRVIGRGSYAKVLM 632
            ||.:       |.||||.    |||:....|...|.          .||:|::|:|:|.|.||..
 Worm    35 DHMYSNVADGQISAPPPSSSYMEDPMMESIQLCASAINPPNVRVGPEDFQLLKVLGKGGYGKVFQ 99

  Fly   633 VELRRTR-----RIYAMKVIKKA-LVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLF 691
            |  |:|.     :|:||||::|| :|.:.:|....:.|:::.| |...||:..|...|||..:|:
 Worm   100 V--RKTTGSDNGQIFAMKVLQKATIVRNQKDTAHTKAERNILE-AVKSPFICDLLYAFQTGGKLY 161

  Fly   692 FVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKL 756
            .::|::.||:|..|::|:....|..|:||.:||.::|..||::||||||||.:|:|||..||:||
 Worm   162 LILEYLSGGELFMHLEREGMFMENVAKFYLSEIVVSLEHLHQQGIIYRDLKPENILLDAYGHVKL 226

  Fly   757 TDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGAS 821
            ||:|:|||.|.....|.|||||..|:|||||....:|.:||||:||.|:::||.|..||......
 Worm   227 TDFGLCKEEIEGDQKTHTFCGTIEYMAPEILMRCGHGKAVDWWSLGALMFDMLTGGPPFTAENRR 291

  Fly   822 ENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKN 886
            :..|:         ||:..:.:|..||..|..::|..|.::...|||.....| .:|.||.|||.
 Worm   292 KTIDK---------ILKGRLTLPAYLSNEARDLIKKLLKRHVDTRLGAGLSDA-EEIKSHAFFKT 346

  Fly   887 MDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPDDDHVIDNID---QSEFEGFEYVN 948
            .||.|:..:|:..||||.:::|.|.:.|...||    ::||.|.....|..   .:.|.||.||.
 Worm   347 TDWNLVYARQLEAPFKPNIENDEDTSLFDARFT----KMTPVDSPCETNFSLNGDNPFVGFTYVA 407

  Fly   949 PLLMSL 954
            |.::.:
 Worm   408 PSVLEM 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 130/335 (39%)
rsks-1NP_499447.2 STKc_p70S6K 86..408 CDD:270736 132/338 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.