DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aPKC and F31E3.2

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_498522.3 Gene:F31E3.2 / 175977 WormBaseID:WBGene00017950 Length:441 Species:Caenorhabditis elegans


Alignment Length:393 Identity:118/393 - (30%)
Similarity:189/393 - (48%) Gaps:69/393 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 KLLVHKKCHKLVQKHCTDQPEPLVKERA--EESSDPIPVPLPPLPYEAMSGGAEACETHDHAHIV 594
            ||....:..||  |.|    .|.:|.|.  .|.:|    |.||:|...:.         |:....
 Worm    48 KLAFKSRLQKL--KKC----RPHLKRRTYKVEEAD----PRPPVPRFIVD---------DYGDYE 93

  Fly   595 APPP---------------PEDPLEPGTQRQYSLNDFELIRVIGRGSYAKVLMVE-LRRTRRIYA 643
            .|.|               ||.|    |:...:...|.|.|.:||||:..|.... :..:.|.:|
 Worm    94 KPEPTRKEFAIPWFEHLFLPEFP----TRSVINEKSFVLERQLGRGSFGVVYCASAIHDSERKFA 154

  Fly   644 MKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRG--GDLMYHM 706
            :|:.:|..:.....:..|:.|..:.....:|||:...:|.:||.:.|:.::::..|  ||| :.:
 Worm   155 IKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDL-FSV 218

  Fly   707 QRQR-RLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGD 770
            .||| .|.|...|...||::.|::|||:..:||||:||:||:||..||..|.|:|:.|: ::.|.
 Worm   219 WRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKK-LKQGS 282

  Fly   771 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQV 835
            :|.|.|||..|::|::..|..|...||||:|||||:.:|.|..|:..:.|:.:.:....||    
 Worm   283 STGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDY---- 343

  Fly   836 ILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGC----HRESAFMDIVSHPFFKNMDWELLERKQ 896
                  ..|...|...|:::         ||:..    ||..:|..:.:||||:::|:..||:|.
 Worm   344 ------STPIGCSREFANLM---------DRMLAVSITHRLCSFTVLHAHPFFRSIDFSKLEQKD 393

  Fly   897 VTP 899
            .||
 Worm   394 YTP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 6/17 (35%)
STKc_aPKC 620..947 CDD:270740 94/288 (33%)
F31E3.2NP_498522.3 STKc_AGC 132..381 CDD:270693 85/269 (32%)

Return to query results.
Submit another query.