DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and CIT

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_011536085.1 Gene:CIT / 11113 HGNCID:1985 Length:2084 Species:Homo sapiens


Alignment Length:354 Identity:117/354 - (33%)
Similarity:181/354 - (51%) Gaps:32/354 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 QYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNH 674
            |.|..|||:..::|.|.:|:|.:|..:.|..||||||:||..:...|.:.:.:.|:::. :.|..
Human    91 QPSAKDFEVRSLVGCGHFAEVQVVREKATGDIYAMKVMKKKALLAQEQVSFFEEERNIL-SRSTS 154

  Fly   675 PFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQR-QRRLPEEHARFYAAEISLALNFLHEKGIIY 738
            |::..|...||..:.|:.|:|:..||||:..:.| :.:|.|...:||.||:.||::.:|..|.::
Human   155 PWIPQLQYAFQDKNHLYLVMEYQPGGDLLSLLNRYEDQLDENLIQFYLAELILAVHSVHLMGYVH 219

  Fly   739 RDLKLDNVLLDHEGHIKLTDYG-MCKEGIRPGDTTSTFCGTPNYIAPEIL---RGE---DYGFSV 796
            ||:|.:|:|:|..|||||.|:| ..|.............|||:|:|||:|   .|:   .||...
Human   220 RDIKPENILVDRTGHIKLVDFGSAAKMNSNKMVNAKLPIGTPDYMAPEVLTVMNGDGKGTYGLDC 284

  Fly   797 DWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNK 861
            |||::||:.|||:.||||| ..|.|.....|..::      ::.::.|..     ..|...||:.
Human   285 DWWSVGVIAYEMIYGRSPF-AEGTSARTFNNIMNF------QRFLKFPDD-----PKVSSDFLDL 337

  Fly   862 NPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANF-PPE----FTGE 921
            ..:...|......|..:..||||..:||..:  :...|||.|.|.||.|.:|| .||    .:..
Human   338 IQSLLCGQKERLKFEGLCCHPFFSKIDWNNI--RNSPPPFVPTLKSDDDTSNFDEPEKNSWVSSS 400

  Fly   922 AVQLTPDDDHVIDNIDQSEFEGFEYVNPL 950
            ..||:|..    .:.::..|.||.|...|
Human   401 PCQLSPSG----FSGEELPFVGFSYSKAL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 110/339 (32%)
CITXP_011536085.1 STKc_CRIK 95..422 CDD:270752 113/345 (33%)
CwlO1 442..>598 CDD:443091
SMC_prok_B 531..1343 CDD:274008
CRIK 1401..1456 CDD:410364
PH 1486..1605 CDD:459697
CNH 1650..1946 CDD:214481
Blue background indicates that the domain is not in the aligned region.

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