DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and rskrb

DIOPT Version :10

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_003200943.1 Gene:rskrb / 100537227 ZFINID:ZDB-GENE-120215-252 Length:445 Species:Danio rerio


Alignment Length:385 Identity:110/385 - (28%)
Similarity:180/385 - (46%) Gaps:90/385 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 PEDP--LEPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKA-------LVTD 654
            ||.|  :.||.:.      |:::..|.:||:..:|.|:.:..::.||:|||.|:       |...
Zfish    89 PEFPHRIVPGQEH------FQVLGYIAKGSFGPILKVKDKSKQKTYAVKVIPKSEILRLGVLEQS 147

  Fly   655 DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARF 719
            .|::        :.:....|||:..|..|:||...::.:.::...|||..:.....:..|:..:.
Zfish   148 KEEV--------IVQRQVRHPFVHDLQDCWQTQRHIYIMCDYCSTGDLYTYWVMIGQFGEDVVKV 204

  Fly   720 YAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAP 784
            :|||:..||.|||:..||:||:|::||||..:||::|.|:|:.:. :..|....|.|||..|:||
Zfish   205 FAAELGSALGFLHDCAIIHRDVKMENVLLTDQGHLRLADFGLSRR-LERGGRAFTICGTIQYMAP 268

  Fly   785 EILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIR-----IP 844
            |:|.|..|..:.|||:||:||:.:..|:.|     ....||        ..::.:.:|     :|
Zfish   269 EVLSGGPYNHASDWWSLGILLFALATGKFP-----VPPEPD--------HCLMLRRVRSFPYDMP 320

  Fly   845 RSLSVRAASVLKGFLNKNPADRLGC----HRESAFMDIVSH--PFFKNMDWELLERKQVTP---- 899
            ::.|...|.:|...|.|.||.||..    .|::.|     |  ||    |..||::   ||    
Zfish   321 KTFSPSFALLLTELLCKTPARRLRTLERFKRQTFF-----HGTPF----DSHLLQK---TPMELI 373

  Fly   900 ---------PFKPR----LDSDRDLANFPPEF------TGEAVQLTPDDDHVIDNIDQSE 940
                     |.|.|    |:|   ..||..:|      |..|..|:|    .:.|:::.|
Zfish   374 LELKNRPDRPAKARRGLTLES---FPNFDCDFLLSSPCTPAAQDLSP----TLANMERVE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 104/362 (29%)
rskrbXP_003200943.1 STKc_AGC 108..355 CDD:270693 81/268 (30%)
Blue background indicates that the domain is not in the aligned region.

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