DRSC/TRiP Functional Genomics Resources

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Protein Alignment aPKC and prkcg

DIOPT Version :9

Sequence 1:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_001921715.1 Gene:prkcg / 100003514 ZFINID:ZDB-GENE-090206-1 Length:695 Species:Danio rerio


Alignment Length:713 Identity:231/713 - (32%)
Similarity:321/713 - (45%) Gaps:224/713 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 PIPVPIPTVPMGVAPSSQQMSQHQLQSEEEIEPAYATVFPNVPQAPGLSCDGEDRSIYRRGARRW 489
            |.|...|......:|||..:            |:..:..|.:|            ...|:||.:.
Zfish     7 PSPSLSPLALSSPSPSSSPL------------PSPLSPPPRLP------------VFQRKGALKH 47

  Fly   490 RKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLVQKHC-----TD 549
            :::..|..|.|.|:.|.:..||::|.|.|||:|:|||:|..|..:|||:||:.|...|     ..
Zfish    48 KRVIEVKDHQFTARFFKQPTFCSHCTDFIWGIGKQGFQCQVCSFVVHKRCHEFVTFTCPGAITAP 112

  Fly   550 QPEPL----------------------------------------VKERAEES------------ 562
            :||.|                                        |.:|.|.|            
Zfish   113 KPEDLKSKHKFKVHTYSSPTFCDHCGSLLYGLIHQGMKCGCCDMNVHKRCESSVPSLCGQDHTEK 177

  Fly   563 ---------------------------------SDP------IPVP--------------LPPLP 574
                                             |||      ||.|              |.|:.
Zfish   178 RGRIRLTVRGEKEDIYITVHEALNLIPMDPNGLSDPYVKLKLIPDPKSHSKQKTKTIRSTLNPIW 242

  Fly   575 YE--------------------------------AMSGGAEAC--------------ETHDHAHI 593
            .|                                |:|.|....              :..::.:|
Zfish   243 NESFTFSVRGRQWDRRLSVEVWDWDRTSRNDFMGALSFGVSEIFRRSVSGWFKLLNQDEGEYYNI 307

  Fly   594 VAPPP----PEDPLEPGT-----------------------------QRQYSLNDFELIRVIGRG 625
            ..|.|    ||:.|.|..                             :....|:||..:.|:|:|
Zfish   308 PVPDPDLQVPEEILMPSIPPTPSPVTTPVPAVTPPALSPAPAVLHTGKGHIGLHDFNFLMVLGKG 372

  Fly   626 SYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRL 690
            |:.|||:.|.:.:.|::|:|::||.::..|||.:....|:.|...:....||..|:..|||..||
Zfish   373 SFGKVLLAEEKGSERLFAIKMLKKDVLFQDEDTESAMVERRVLALSGRPHFLTSLYCAFQTEDRL 437

  Fly   691 FFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIK 755
            ::|:|:|.|||||:|:|...:..|.||.||||||::.|.|||.||||||||||||||||.|||||
Zfish   438 YYVMEYVNGGDLMFHIQIVGKFKEPHAAFYAAEIAVGLFFLHNKGIIYRDLKLDNVLLDSEGHIK 502

  Fly   756 LTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGA 820
            :.|:|||:||:..||||.||||||:||||||:..:.||.:||||:.||||||||||:.|||  |.
Zfish   503 IADFGMCREGMMEGDTTRTFCGTPDYIAPEIVAYQPYGKAVDWWSYGVLLYEMLAGQPPFD--GI 565

  Fly   821 SENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFK 885
            .       |:.|||.|:|:::..|:|||..|.::.||.|.||||.||| ..|.|..::..||||:
Zfish   566 D-------EEELFQSIMEQSVSYPKSLSREAVAICKGLLTKNPAKRLG-GGEDAERELREHPFFR 622

  Fly   886 NMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYVN 948
            .:||:.|||.::.||||||....:. .||...||..:..|||.|..|:..|:|.||:.|.::|
Zfish   623 WIDWDRLERLEIQPPFKPRSGGKKG-ENFDKFFTSTSSALTPSDPDVLAAINQEEFQDFTFMN 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aPKCNP_001260984.1 C1_1 498..550 CDD:278556 24/56 (43%)
S_TKc 616..884 CDD:214567 138/267 (52%)
STKc_aPKC 620..947 CDD:270740 164/326 (50%)
prkcgXP_001921715.1 C1_1 56..108 CDD:278556 24/51 (47%)
C1_1 121..173 CDD:278556 4/51 (8%)
C2_PKC_alpha_gamma 178..308 CDD:175992 12/129 (9%)
S_TKc 363..621 CDD:214567 138/267 (52%)
STKc_cPKC 366..684 CDD:270739 164/328 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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