DRSC/TRiP Functional Genomics Resources

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Protein Alignment NEFH and Mip

DIOPT Version :10

Sequence 1:NP_066554.2 Gene:NEFH / 4744 HGNCID:7737 Length:1020 Species:Homo sapiens
Sequence 2:NP_648971.1 Gene:Mip / 39933 FlyBaseID:FBgn0036713 Length:211 Species:Drosophila melanogaster


Alignment Length:50 Identity:15/50 - (30%)
Similarity:18/50 - (36%) Gaps:14/50 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    32 GGAGGTRSAAGSSSGFHSWTRTSVSSVSASPSRFRGAGAASSTDSLDTLS 81
            |.|.|...|:||:              .:.||...|.|..|....||.||
  Fly    20 GSACGNLVASGSA--------------GSPPSNEPGGGGLSEQVVLDQLS 55

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEFHNP_066554.2 Head 1..100 14/49 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..83 8/23 (35%)
Filament 96..412 CDD:459643
Coil 1A 101..132
Linker 1 133..145
Coil 1B 146..244
Linker 12 245..266
Coil 2A 267..288
Linker 2 289..292
PTZ00121 <290..1014 CDD:173412
Coil 2B 293..413
Tail 414..1020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..1020
30 X 6 AA repeats of K-S-P-[AEPV]-[EAK]-[AEVK] 525..826
MipNP_648971.1 None
Blue background indicates that the domain is not in the aligned region.

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